CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF15723
(
Drosophila ananassae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0092747
T43237_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0118915
RRM
10
81
IQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPVQSRICYVKYTDTSSVPVAQHLTNTVFIDRAL
FBpp0118915
RRM
166
230
IIVCDVKNEWRLDDLMECFQRAGEVKYARWAEKENKTYCMIEFCEQTSIIHALRMQGQEFKGGHL
Links
Other
RRM
family RBPs
Other
Drosophila ananassae
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GD23635
Drosophila simulans
FBgn0195012
N
0.978
GM17744
Drosophila sechellia
FBgn0172652
N
0.978
Srp54
Drosophila melanogaster
FBgn0024285
N
0.978
GE18876
Drosophila yakuba
FBgn0236256
N
0.971
GA18291-RA
Drosophila pseudoobscura
FBgn0078296
N
0.964
GG10062
Drosophila erecta
FBgn0102374
N
0.964
GI17720
Drosophila mojavensis
FBgn0140461
N
0.964
GJ17548
Drosophila virilis
FBgn0204718
N
0.957
GL18941
Drosophila persimilis
FBgn0156542
N
0.957
GK18279
Drosophila willistoni
FBgn0220278
N
0.949
GH11300
Drosophila grimshawi
FBgn0118780
N
0.942
CPIJ018619
Culex quinquefasciatus
CPIJ018619
N
0.710
CpipJ_CPIJ018619
Culex pipiens
CpipJ_CPIJ018619
N
0.710