CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF16214
(
Drosophila ananassae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0093236
T43241_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0119406
RRM
7
69
VFVGSLPPGCKPEELRRLFANYGSVVECDVMNRCAFVHLANVDMADAAISALNGTNFKGQNIV
Links
Other
RRM
family RBPs
Other
Drosophila ananassae
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GK14083
Drosophila willistoni
FBgn0216089
N
0.841
GA26866-RA
Drosophila pseudoobscura
FBgn0248238
N
0.794
GL13491
Drosophila persimilis
FBgn0151096
N
0.794
GH22178
Drosophila grimshawi
FBgn0129639
N
0.778
GI21968
Drosophila mojavensis
FBgn0144697
N
0.778
GJ14327
Drosophila virilis
FBgn0201541
N
0.762
CG7903
Drosophila melanogaster
FBgn0039730
D
0.721
GM12198
Drosophila sechellia
FBgn0167135
I
0.721
GG11980
Drosophila erecta
FBgn0104272
I
0.706
GE10405
Drosophila yakuba
FBgn0228270
I
0.706