CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GM22984
(
Drosophila sechellia
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0177852
T43869_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0204461
RRM
7
75
FLADLPTRTSESDLQSLFQDYGHVEHVDLKRKEQDGATKVIAFVTVQTDDAQYCVNELKWQKLHGEKLR
Links
Other
RRM
family RBPs
Other
Drosophila sechellia
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GD17457
Drosophila simulans
FBgn0189010
N
0.986
CG14230
Drosophila melanogaster
FBgn0031062
N
0.986
GG19249
Drosophila erecta
FBgn0111454
N
0.971
GE15868
Drosophila yakuba
FBgn0233429
N
0.913
GF20211
Drosophila ananassae
FBgn0097218
N
0.707