CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
GD17457
(
Drosophila simulans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0189010
T43954_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0215859
RRM
7
75
FLADLPTRTSESDLQSLFQDYGHVEHVDLKRKEQDGATKVIAFVTVQTDDAQYCVNELKWQKLHGEKVR
Links
Other
RRM
family RBPs
Other
Drosophila simulans
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GM22984
Drosophila sechellia
FBgn0177852
N
0.986
CG14230
Drosophila melanogaster
FBgn0031062
N
0.971
GG19249
Drosophila erecta
FBgn0111454
N
0.957
GE15868
Drosophila yakuba
FBgn0233429
N
0.899