CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ISCW016642
(
Ixodes scapularis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ISCW016642
T44878_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW016642-PA
RRM
68
130
KCKLDDIYEKFAEYGEIKNLHLNLDRRTGFLKGYALVEYETFKEAQAAIDALNGAKILDQTIS
Links
Other
RRM
family RBPs
Other
Ixodes scapularis
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh2_pg.C_4600002
Branchiostoma floridae
estExt_fgenesh2_pg.C_4600002
I
0.718
e_gw.589.3.1
Branchiostoma floridae
e_gw.589.3.1
I
0.718
e_gw1.53.304.1
Lottia gigantea
e_gw1.53.304.1
I
0.704