e_gw1.53.304.1 (Lottia gigantea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw1.53.304.1 T50051_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM8A
M054_0.6 		Homo sapiens RYGCGCB RNAcompete
Ray et al.(2013)
RNCMPT00056 		0.732
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.53.304.1 RRM 77 147

Links

Other RRM family RBPs
Other Lottia gigantea RBPs

75 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.589.3.1 Branchiostoma floridae e_gw.589.3.1 I 0.873
estExt_fgenesh2_pg.C_4600002 Branchiostoma floridae estExt_fgenesh2_pg.C_4600002 I 0.873
nasonia_NCBI_hmm460663 Nasonia vitripennis nasonia_NCBI_hmm460663 I 0.845
amel4_ncbi_hmm2170 Apis mellifera amel4_ncbi_hmm2170 I 0.831
estExt_Genewise1.C_210127 Daphnia pulex estExt_Genewise1.C_210127 I 0.803
estExt_fgenesh1_pg.C_1530030 Capitella teleta estExt_fgenesh1_pg.C_1530030 I 0.775
XP_001194199.1 Strongylocentrotus purpuratus XP_001194199.1 I 0.761
XP_792124.1 Strongylocentrotus purpuratus XP_792124.1 I 0.761
e_gw.27.177.1 Nematostella vectensis e_gw.27.177.1 N 0.761
gw.617.10.1 Nematostella vectensis gw.617.10.1 N 0.761
gw.10.199.1 Nematostella vectensis gw.10.199.1 N 0.761
CpipJ_CPIJ007339 Culex pipiens CpipJ_CPIJ007339 I 0.746
RBM8A Macropus eugenii ENSMEUG00000016058 I 0.746
rbm8a Danio rerio ENSDARG00000016516 I 0.746
CPIJ007339 Culex quinquefasciatus CPIJ007339 I 0.746
RBM8A Macaca mulatta ENSMMUG00000016051 I 0.732
RBM8A Monodelphis domestica ENSMODG00000018752 I 0.732
RBM8A Homo sapiens ENSG00000131795 D 0.732
RBM8A Felis catus ENSFCAG00000005412 I 0.732
RBM8A Gasterosteus aculeatus ENSGACG00000013157 I 0.732
RBM8A Gorilla gorilla ENSGGOG00000005422 I 0.732
ENSLAFG00000021886 Loxodonta africana ENSLAFG00000021886 I 0.732
ENSPPYG00000000929 Pongo pygmaeus ENSPPYG00000000929 I 0.732
RBM8A Sus scrofa ENSSSCG00000006684 I 0.732
RBM8A Sorex araneus ENSSARG00000013289 I 0.732
RBM8A Tetraodon nigroviridis ENSTNIG00000006869 I 0.732
RBM8A Takifugu rubripes ENSTRUG00000013173 I 0.732
RBM8A Tursiops truncatus ENSTTRG00000009081 I 0.732
Rbm8a Rattus norvegicus ENSRNOG00000021215 I 0.732
RBM8A Pteropus vampyrus ENSPVAG00000014471 I 0.732
RBM8A Oryctolagus cuniculus ENSOCUG00000025693 I 0.732
B020018G12Rik Mus musculus ENSMUSG00000078184 I 0.732
RBM8A Otolemur garnettii ENSOGAG00000000202 I 0.732
Q6DTK7_HORSE Equus caballus ENSECAG00000022024 I 0.732
RBM8A Pan troglodytes ENSPTRG00000001201 I 0.732
Rbm8a Mus musculus ENSMUSG00000038374 I 0.732
ENSETEG00000017932 Echinops telfairi ENSETEG00000017932 I 0.732
AGAP006365 Anopheles gambiae AGAP006365 I 0.732
Ame_R013073 Ailuropoda melanoleuca Ame_R013073 I 0.732
RBM8A_BOVIN Bos taurus ENSBTAG00000008369 I 0.732
AAEL006748 Aedes aegypti AAEL006748 N 0.732
RBM8A Cavia porcellus ENSCPOG00000022453 I 0.732
LOC100399389 Callithrix jacchus ENSCJAG00000002209 I 0.732
RBM8A Canis familiaris ENSCAFG00000023172 I 0.732
Q9DF42 Xenopus laevis Q9DF42 I 0.718
AAH73361 Xenopus laevis AAH73361 I 0.718
Q6PH90 Xenopus laevis Q6PH90 I 0.718
EuGene.0000060244 Micromonas pusilla EuGene.0000060244 N 0.718
ENSPCAG00000002146 Procavia capensis ENSPCAG00000002146 I 0.718
PHUM390470 Pediculus humanus PHUM390470 N 0.718
AAG27092 Xenopus laevis AAG27092 I 0.718
AAH56659 Xenopus laevis AAH56659 I 0.718
SPPG_02323 Spizellomyces punctatus SPPG_02323 I 0.718
WUBG_00553 Wuchereria bancrofti WUBG_00553 N 0.718
Q8JJC6_ORYLA Oryzias latipes ENSORLG00000016263 I 0.718
GK23248 Drosophila willistoni FBgn0225210 N 0.704
GD10630 Drosophila simulans FBgn0182397 N 0.704
GM21093 Drosophila sechellia FBgn0175974 N 0.704
GL17620 Drosophila persimilis FBgn0155223 N 0.704
GE19253 Drosophila yakuba FBgn0236606 N 0.704
Aqu1.218379 Amphimedon queenslandica Aqu1.218379 N 0.704
70687 Helobdella robusta 70687 N 0.704
DGIL_AUG5s25g7t1 Acyrtosiphon pisum DGIL_AUG5s25g7t1 I 0.704
ISCW016642 Ixodes scapularis ISCW016642 N 0.704
GG23412 Drosophila erecta FBgn0115559 N 0.704
GA21317-RA Drosophila pseudoobscura FBgn0081305 N 0.704
ENSCSAVG00000005685 Ciona savignyi ENSCSAVG00000005685 I 0.704
LOAG_04407 Loa loa LOAG_04407 N 0.704
Bm1_46120 Brugia malayi Bm1_46120 N 0.704
Smp_002550 Schistosoma mansoni Smp_002550 I 0.704
RBM8A Spermophilus tridecemlineatus ENSSTOG00000013917 I 0.704
tsu Drosophila melanogaster FBgn0033378 N 0.704
DGIL_AUG5s13034g4t1 Acyrtosiphon pisum DGIL_AUG5s13034g4t1 I 0.704
Sjc_0039250 Schistosoma japonicum Sjc_0039250 I 0.704
GF11955 Drosophila ananassae FBgn0088994 N 0.704