A9PEY6_POPTR (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0007s07800 T45543_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0007s07800.1 RRM 342 410
POPTR_0007s07800.1 RRM 441 514
POPTR_0007s07800.2 RRM 300 368
POPTR_0007s07800.2 RRM 399 472

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9H5S7_POPTR Populus trichocarpa POPTR_0005s09600 N 0.853
29675.m000389 Ricinus communis 29675.m000389 N 0.748
cassava12938.valid.m1 Manihot esculenta cassava12938.valid.m1 N 0.741
cassava12937.valid.m1 Manihot esculenta cassava12937.valid.m1 N 0.741
cassava35933.valid.m1 Manihot esculenta cassava35933.valid.m1 N 0.720
ppa007807m Prunus persica ppa007807m N 0.713