POPTR_0019s04720 (Populus trichocarpa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 POPTR_0019s04720 T45707_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0019s04720.1 RRM 38 104
POPTR_0019s04720.1 RRM 360 420

Links

Other RRM family RBPs
Other Populus trichocarpa RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9I5U9_POPTR Populus trichocarpa POPTR_0013s05120 N 0.838
PK28309.1 Cannabis sativa PK28309.1 N 0.791
29950.m001170 Ricinus communis 29950.m001170 N 0.775
GSVIVG00020933001 Vitis vinifera GSVIVG00020933001 N 0.768
cassava35697.valid.m1 Manihot esculenta cassava35697.valid.m1 N 0.746
Medtr7g100170 Medicago truncatula Medtr7g100170 N 0.727
ppa005530m Prunus persica ppa005530m N 0.720