ppa005530m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa005530m T58358_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa005530m RRM 24 91
ppa005530m RRM 369 443

Links

Other RRM family RBPs
Other Prunus persica RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29950.m001170 Ricinus communis 29950.m001170 N 0.860
GSVIVG00020933001 Vitis vinifera GSVIVG00020933001 N 0.853
B9I5U9_POPTR Populus trichocarpa POPTR_0013s05120 N 0.839
cassava35697.valid.m1 Manihot esculenta cassava35697.valid.m1 N 0.832
Glyma16g04710.1 Glycine max Glyma16g04710.1 N 0.776
AT1G09230 Arabidopsis thaliana AT1G09230-TAIR-G N 0.748
XM_002892448.1 Arabidopsis lyrata fgenesh2_kg.1__966__AT1G09230.1 N 0.748
PK28309.1 Cannabis sativa PK28309.1 N 0.748
BRADI2G18227 Brachypodium distachyon BRADI2G18227 N 0.748
LOC_Os03g21020 Oryza sativa LOC_Os03g21020 N 0.741
Medtr7g100170 Medicago truncatula Medtr7g100170 N 0.727
GRMZM2G042615 Zea mays GRMZM2G042615 N 0.727
SB01G036600 Sorghum bicolor Sb01g036600 N 0.727
POPTR_0019s04720 Populus trichocarpa POPTR_0019s04720 N 0.720