CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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EIN_223600
(
Entamoeba invadens
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
EIN_223600
T46795_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
EIN_223600
RRM
230
300
LFVCKLNQCTRDSDLEAIFDKFGKVVSAEVICDKKTGNSLGYAFIEFEAKEACEEAYKKMDNVIIDDRRIH
Links
Other
RRM
family RBPs
Other
Entamoeba invadens
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
gw1.1.256.1
Neurospora tetrasperma
gw1.1.256.1
N
0.718
BGIBMGA008977
Bombyx mori
BGIBMGA008977
N
0.718
SPPG_03169
Spizellomyces punctatus
SPPG_03169
N
0.718
NCU10166
Neurospora crassa
NCU10166
N
0.718
estExt_Genewise1Plus.C_40228
Batrachochytrium dendrobatidis
estExt_Genewise1Plus.C_40228
N
0.718
Pa_2_13850
Podospora anserina
Pa_2_13850
N
0.718
estExt_Genewise1Plus.C_12820
Neurospora discreta
estExt_Genewise1Plus.C_12820
N
0.718
PPIL4
Meleagris gallopavo
ENSMGAG00000012596
N
0.704
PPIL4
Gallus gallus
ENSGALG00000012364
N
0.704
ENSOANG00000001063
Ornithorhynchus anatinus
ENSOANG00000001063
N
0.704
estExt_fgenesh2_pm.C_1170007
Branchiostoma floridae
estExt_fgenesh2_pm.C_1170007
N
0.704
PPIL4
Takifugu rubripes
ENSTRUG00000006670
N
0.704
PHUM268300
Pediculus humanus
PHUM268300
N
0.704
e_gw.42.57.1
Nematostella vectensis
e_gw.42.57.1
N
0.704
MGG_10681
Magnaporthe oryzae
MGG_10681
N
0.704
XP_782627.2
Strongylocentrotus purpuratus
XP_782627.2
N
0.704
estExt_Genewise1Plus.C_61472
Cryphonectria parasitica
estExt_Genewise1Plus.C_61472
N
0.704
estExt_Genewise1.C_30053
Myceliophthora thermophila
estExt_Genewise1.C_30053
N
0.704
fgenesh1_pm.C_scaffold_9000117
Mycosphaerella fijiensis
fgenesh1_pm.C_scaffold_9000117
N
0.704
e_gw1.6.1078.1
Selaginella moellendorfii
e_gw1.6.1078.1
N
0.704
XP_001180629.1
Strongylocentrotus purpuratus
XP_001180629.1
N
0.704
estExt_Genewise1Plus.C_chr_40303
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_40303
N
0.704
XP_001192414.1
Strongylocentrotus purpuratus
XP_001192414.1
N
0.704
XP_787384.2
Strongylocentrotus purpuratus
XP_787384.2
N
0.704