Aqu1.221418 (Amphimedon queenslandica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Aqu1.221418 T49009_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.221418 RRM 17 87
Aqu1.221418 RRM 105 174
Aqu1.221418 RRM 197 266
Aqu1.221418 RRM 300 369

Links

Other RRM family RBPs
Other Amphimedon queenslandica RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPC4 Gallus gallus ENSGALG00000003800 I 0.708
PABPC3 Takifugu rubripes ENSTRUG00000011577 I 0.708
PABPC3 Gasterosteus aculeatus ENSGACG00000003572 I 0.708
ENSOANG00000010001 Ornithorhynchus anatinus ENSOANG00000010001 I 0.708
AAH73435 Xenopus laevis AAH73435 I 0.708
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.704
ISCW014211 Ixodes scapularis ISCW014211 I 0.701
XP_801795.2 Strongylocentrotus purpuratus XP_801795.2 I 0.701
XP_001177907.1 Strongylocentrotus purpuratus XP_001177907.1 I 0.701
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.701
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.701
PABPC4 Taeniopygia guttata ENSTGUG00000001266 I 0.701
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.701
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.701
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.701
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.701
PABPC1 Homo sapiens ENSG00000070756 D 0.701
pabpc1a Danio rerio ENSDARG00000017219 I 0.701
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.701
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.701
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.701
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.701
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.701