cassava1154.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava1154.valid.m1 T49087_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava1154.valid.m1 RRM 113 151
cassava1154.valid.m1 RRM 148 216
cassava1154.valid.m1 RRM 263 327

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava1155.valid.m1 Manihot esculenta cassava1155.valid.m1 N 0.928
cassava1152.valid.m1 Manihot esculenta cassava1152.valid.m1 I 0.816
29801.m003218 Ricinus communis 29801.m003218 I 0.762
B9N4W3_POPTR Populus trichocarpa POPTR_0004s15080 I 0.720
B9HRX8_POPTR Populus trichocarpa POPTR_0009s10820 I 0.710