estExt_fgenesh1_pg.C_1060073 (Nematostella vectensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_1060073 T50462_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_1060073 RRM 346 416

Links

Other RRM family RBPs
Other Nematostella vectensis RBPs

39 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SAFB2 Sorex araneus ENSSARG00000000649 N 0.732
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.732
amel4_ncbi_hmm13354 Apis mellifera amel4_ncbi_hmm13354 N 0.732
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.732
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.732
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.718
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.718
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.718
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.718
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.718
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.718
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.718
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.718
SAFB2 Gallus gallus ENSGALG00000001948 N 0.718
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.718
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.718
SAFB2 Homo sapiens ENSG00000130254 N 0.718
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.718
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.718
SAFB2 Bos taurus ENSBTAG00000001790 N 0.718
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.718
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.718
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.718
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.718
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.718
LOC100064922 Equus caballus ENSECAG00000018978 N 0.718
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.718
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.718
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.718
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.704
SAFB Cavia porcellus ENSCPOG00000026322 N 0.704
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.704
fgenesh1_pm.C_scaffold_151000005 Capitella teleta fgenesh1_pm.C_scaffold_151000005 N 0.704
safb Danio rerio ENSDARG00000020467 N 0.704
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.704
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.704
Safb2 Mus musculus ENSMUSG00000042625 N 0.704
SAFB2 Felis catus ENSFCAG00000011834 N 0.704
SAFB Oryzias latipes ENSORLG00000016989 N 0.704