SAFB2 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000011394 T35834_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000010241 RRM 410 480

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

135 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SAFB2 Sorex araneus ENSSARG00000000649 N 0.972
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.958
LOC100064922 Equus caballus ENSECAG00000018978 N 0.958
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.958
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.958
SAFB2 Homo sapiens ENSG00000130254 N 0.958
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.958
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.958
SAFB2 Bos taurus ENSBTAG00000001790 N 0.958
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.958
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.958
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.958
SAFB Cavia porcellus ENSCPOG00000026322 N 0.958
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.958
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.958
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.958
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.958
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.958
SAFB Loxodonta africana ENSLAFG00000003840 N 0.944
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.944
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.944
safb Danio rerio ENSDARG00000020467 N 0.944
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.944
SAFB Echinops telfairi ENSETEG00000018679 N 0.944
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.944
SAFB2 Felis catus ENSFCAG00000011834 N 0.944
LOC100064953 Equus caballus ENSECAG00000018659 N 0.944
SAFB Oryctolagus cuniculus ENSOCUG00000014628 N 0.930
SAFB Homo sapiens ENSG00000160633 N 0.930
ENSBTAG00000007875 Bos taurus ENSBTAG00000007875 N 0.930
Ame_R016389 Ailuropoda melanoleuca Ame_R016389 N 0.930
Safb Mus musculus ENSMUSG00000071054 N 0.930
Safb Dipodomys ordii ENSDORG00000016200 N 0.930
SAFB Pteropus vampyrus ENSPVAG00000004913 N 0.930
SAFB Tarsius syrichta ENSTSYG00000001851 N 0.930
SAFB Tursiops truncatus ENSTTRG00000013588 N 0.930
SAFB Vicugna pacos ENSVPAG00000012043 N 0.930
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.930
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.930
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.930
SAFB Dasypus novemcinctus ENSDNOG00000015746 N 0.930
SAFB Sorex araneus ENSSARG00000010475 N 0.930
ENSPPYG00000009428 Pongo pygmaeus ENSPPYG00000009428 N 0.930
SAFB Callithrix jacchus ENSCJAG00000017081 N 0.930
A7E314_BOVIN Bos taurus ENSBTAG00000035585 N 0.930
SAFB Microcebus murinus ENSMICG00000008739 N 0.930
SAFB Felis catus ENSFCAG00000011835 N 0.930
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.930
SAFB Myotis lucifugus ENSMLUG00000001081 N 0.930
SAFB Gorilla gorilla ENSGGOG00000015109 N 0.930
SAFB2 Gallus gallus ENSGALG00000001948 N 0.930
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.930
SAFB Canis familiaris ENSCAFG00000018803 N 0.930
SAFB Macaca mulatta ENSMMUG00000017970 N 0.930
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.915
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.915
SAFB Oryzias latipes ENSORLG00000016989 N 0.915
SAFB Pan troglodytes ENSPTRG00000010335 N 0.915
SAFB Ochotona princeps ENSOPRG00000011561 N 0.915
Safb2 Mus musculus ENSMUSG00000042625 N 0.915
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.901
SAFB-2 Taeniopygia guttata ENSTGUG00000000502 N 0.901
ENSMODG00000001236 Monodelphis domestica ENSMODG00000001236 N 0.901
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.901
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.901
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.901
SAFB2 Gallus gallus ENSGALG00000013365 N 0.901
ENSMGAG00000001101 Meleagris gallopavo ENSMGAG00000001101 N 0.901
LOC787645 Bos taurus ENSBTAG00000035584 N 0.901
estExt_fgenesh2_pg.C_sca_50258 Lottia gigantea estExt_fgenesh2_pg.C_sca_50258 N 0.859
fgenesh1_pm.C_scaffold_151000005 Capitella teleta fgenesh1_pm.C_scaffold_151000005 N 0.859
ENSACAG00000016928 Anolis carolinensis ENSACAG00000016928 N 0.859
amel4_ncbi_hmm13354 Apis mellifera amel4_ncbi_hmm13354 N 0.845
AAEL001352 Aedes aegypti AAEL001352 N 0.803
CPIJ012814 Culex quinquefasciatus CPIJ012814 N 0.789
CpipJ_CPIJ012814 Culex pipiens CpipJ_CPIJ012814 N 0.789
168846 Helobdella robusta 168846 N 0.789
AGAP001298 Anopheles gambiae AGAP001298 N 0.775
nasonia_NCBI_hmm598374 Nasonia vitripennis nasonia_NCBI_hmm598374 N 0.775
DGIL_AUG5s7140g4t1 Acyrtosiphon pisum DGIL_AUG5s7140g4t1 N 0.775
DGIL_AUG5s8592g2t1 Acyrtosiphon pisum DGIL_AUG5s8592g2t1 N 0.761
SLTM Meleagris gallopavo ENSMGAG00000005313 N 0.761
SLTM Gallus gallus ENSGALG00000004192 N 0.761
SLTM Taeniopygia guttata ENSTGUG00000006017 N 0.761
Q498L2 Xenopus laevis Q498L2 N 0.746
AAI00172 Xenopus laevis AAI00172 N 0.746
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.746
sltm Xenopus tropicalis ENSXETG00000010840 N 0.746
SLTM Echinops telfairi ENSETEG00000008003 N 0.746
Sltm Dipodomys ordii ENSDORG00000007463 N 0.746
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.746
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.746
PHUM451590 Pediculus humanus PHUM451590 N 0.746
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.732
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.732
SLTM Bos taurus ENSBTAG00000011319 N 0.732
SLTM Canis familiaris ENSCAFG00000016586 N 0.732
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.732
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.732
SLTM Macaca mulatta ENSMMUG00000022200 N 0.732
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.732
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.732
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.732
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.732
SLTM Loxodonta africana ENSLAFG00000017922 N 0.732
LOC100068259 Equus caballus ENSECAG00000011267 N 0.732
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.732
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.732
SLTM Pan troglodytes ENSPTRG00000007121 N 0.732
SLTM Homo sapiens ENSG00000137776 N 0.732
SLTM Vicugna pacos ENSVPAG00000008606 N 0.732
Sltm Mus musculus ENSMUSG00000032212 N 0.718
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.718
SLTM Felis catus ENSFCAG00000004826 N 0.718
SLTM Microcebus murinus ENSMICG00000013069 N 0.718
SLTM Cavia porcellus ENSCPOG00000026109 N 0.718
SLTM Anolis carolinensis ENSACAG00000015120 N 0.718
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.718
GD21133 Drosophila simulans FBgn0192585 N 0.718
GM26630 Drosophila sechellia FBgn0181483 N 0.718
GL13631 Drosophila persimilis FBgn0151236 N 0.718
GJ23544 Drosophila virilis FBgn0210641 N 0.718
estExt_fgenesh1_pg.C_1060073 Nematostella vectensis estExt_fgenesh1_pg.C_1060073 N 0.718
GE23518 Drosophila yakuba FBgn0240697 N 0.718
GK14110 Drosophila willistoni FBgn0216116 N 0.718
GA26852-RA Drosophila pseudoobscura FBgn0248225 N 0.718
NCBI_GNO_7700035 Daphnia pulex NCBI_GNO_7700035 N 0.718
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.718
GF16243 Drosophila ananassae FBgn0093265 N 0.718
GI23570 Drosophila mojavensis FBgn0146296 N 0.718
GG11323 Drosophila erecta FBgn0103624 N 0.718
GH19115 Drosophila grimshawi FBgn0126582 N 0.718
CG6995 Drosophila melanogaster FBgn0039229 N 0.718
SLTM Oryzias latipes ENSORLG00000008161 N 0.704
SLTM Choloepus hoffmanni ENSCHOG00000001125 N 0.704