fgenesh1_pg.C_scaffold_8000060 (Mycosphaerella fijiensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_8000060 T51947_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_8000060 RRM 11 81

Links

Other RRM family RBPs
Other Mycosphaerella fijiensis RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_chr_61262 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_61262 N 0.887
AB08285.1 Alternaria brassicicola AB08285.1 N 0.775
MGG_09885 Magnaporthe oryzae MGG_09885 N 0.761
estExt_fgenesh1_pg.C_160182 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_160182 N 0.761
e_gw1.6.1433.1 Cryphonectria parasitica e_gw1.6.1433.1 N 0.746
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.746
VDAG_04254 Verticillium dahliae VDAG_04254 N 0.746
SNOG_02685 Stagonospora nodorum SNOG_02685 N 0.732
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.732
EAT89416.2 Phaeosphaeria nodorum EAT89416.2 N 0.732
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.718
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.718
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.718
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.704
estExt_Genewise1Plus.C_50197 Neurospora tetrasperma estExt_Genewise1Plus.C_50197 N 0.704
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.704
estExt_fgenesh3_kg.C_70160 Neurospora discreta estExt_fgenesh3_kg.C_70160 N 0.704
e_gw1.7.1285.1 Trichoderma virens e_gw1.7.1285.1 N 0.704
NCU03311 Neurospora crassa NCU03311 N 0.704
e_gw1.1.4045.1 Trichoderma atroviride e_gw1.1.4045.1 N 0.704
e_gw1.4.400.1 Trichoderma reesei e_gw1.4.400.1 N 0.704