fgenesh1_pm.sca_18_chr2_1_0000466 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.sca_18_chr2_1_0000466 T52094_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_18_chr2_1_0000466 RRM 291 348
fgenesh1_pm.sca_18_chr2_1_0000466 RRM 375 440

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

6 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDBG_08298 Verticillium albo atrum VDBG_08298 N 0.774
fgenesh1_pg.C_scaffold_2000270 Trichoderma atroviride fgenesh1_pg.C_scaffold_2000270 N 0.739
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.737
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.737
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.735
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.731