fgenesh1_pg.C_scaffold_2000270 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.C_scaffold_2000270 T51835_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_2000270 RRM 240 305
fgenesh1_pg.C_scaffold_2000270 RRM 328 395

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.993
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.963
VDBG_08298 Verticillium albo atrum VDBG_08298 N 0.806
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.791
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.761
NCU09742 Neurospora crassa NCU09742 N 0.754
CHGG_04655 Chaetomium globosum CHGG_04655 N 0.754
e_gw1.3.1867.1 Neurospora discreta e_gw1.3.1867.1 N 0.754
fgenesh1_pm.C_scaffold_4000255 Neurospora tetrasperma fgenesh1_pm.C_scaffold_4000255 N 0.754
fgenesh1_pm.1_#_413 Myceliophthora thermophila fgenesh1_pm.1_#_413 N 0.746
fgenesh2_pg.1_#_466 Thielavia terrestris fgenesh2_pg.1_#_466 N 0.739
fgenesh1_pm.sca_18_chr2_1_0000466 Nectria haematococca fgenesh1_pm.sca_18_chr2_1_0000466 N 0.739
Pa_6_3170 Podospora anserina Pa_6_3170 N 0.731
estExt_fgenesh1_pg.C_30620 Cryphonectria parasitica estExt_fgenesh1_pg.C_30620 N 0.719