fgenesh1_pm.sca_18_chr2_1_0000776 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.sca_18_chr2_1_0000776 T52096_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_18_chr2_1_0000776 RRM 113 191

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
FOXG_06007 Fusarium oxysporum FOXG_06007 N 0.975
FVEG_03874 Fusarium verticillioides FVEG_03874 N 0.975
FGSG_09233 Fusarium graminearum FGSG_09233 N 0.975
e_gw1.2.16.1 Trichoderma atroviride e_gw1.2.16.1 N 0.962
estExt_GeneWisePlus.C_160009 Trichoderma reesei estExt_GeneWisePlus.C_160009 N 0.962
e_gw1.2.10.1 Trichoderma virens e_gw1.2.10.1 N 0.949
VDAG_05474 Verticillium dahliae VDAG_05474 N 0.861
estExt_fgenesh1_pg.C_20203 Neurospora tetrasperma estExt_fgenesh1_pg.C_20203 N 0.848
estExt_fgenesh2_pg.C_60414 Neurospora discreta estExt_fgenesh2_pg.C_60414 N 0.848
MGG_11229 Magnaporthe oryzae MGG_11229 N 0.848
GLRG_09569 Colletotrichum graminicola GLRG_09569 N 0.848
VDBG_07902 Verticillium albo atrum VDBG_07902 N 0.848
NCU12108 Neurospora crassa NCU12108 N 0.848
estExt_fgenesh1_pg.C_90506 Cryphonectria parasitica estExt_fgenesh1_pg.C_90506 N 0.835
estExt_Genewise1.C_52146 Myceliophthora thermophila estExt_Genewise1.C_52146 N 0.823
e_gw1.5.156.1 Thielavia terrestris e_gw1.5.156.1 N 0.810
Pa_4_7170 Podospora anserina Pa_4_7170 N 0.797
CHGG_09245 Chaetomium globosum CHGG_09245 N 0.797