VDBG_07902 (Verticillium albo atrum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDBG_07902 T31476_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDBG_07902T0 RRM 123 201

Links

Other RRM family RBPs
Other Verticillium albo atrum RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
VDAG_05474 Verticillium dahliae VDAG_05474 N 0.987
GLRG_09569 Colletotrichum graminicola GLRG_09569 N 0.949
NCU12108 Neurospora crassa NCU12108 N 0.937
estExt_fgenesh1_pg.C_20203 Neurospora tetrasperma estExt_fgenesh1_pg.C_20203 N 0.937
estExt_fgenesh2_pg.C_60414 Neurospora discreta estExt_fgenesh2_pg.C_60414 N 0.937
CHGG_09245 Chaetomium globosum CHGG_09245 N 0.911
MGG_11229 Magnaporthe oryzae MGG_11229 N 0.899
e_gw1.5.156.1 Thielavia terrestris e_gw1.5.156.1 N 0.899
estExt_fgenesh1_pg.C_90506 Cryphonectria parasitica estExt_fgenesh1_pg.C_90506 N 0.886
Pa_4_7170 Podospora anserina Pa_4_7170 N 0.873
FGSG_09233 Fusarium graminearum FGSG_09233 N 0.861
FOXG_06007 Fusarium oxysporum FOXG_06007 N 0.848
FVEG_03874 Fusarium verticillioides FVEG_03874 N 0.848
fgenesh1_pm.sca_18_chr2_1_0000776 Nectria haematococca fgenesh1_pm.sca_18_chr2_1_0000776 N 0.848
estExt_Genewise1.C_52146 Myceliophthora thermophila estExt_Genewise1.C_52146 N 0.848
estExt_GeneWisePlus.C_160009 Trichoderma reesei estExt_GeneWisePlus.C_160009 N 0.835
e_gw1.2.16.1 Trichoderma atroviride e_gw1.2.16.1 N 0.835
e_gw1.2.10.1 Trichoderma virens e_gw1.2.10.1 N 0.823
e_gw1.11.630.1 Cochliobolus heterostrophus C5 e_gw1.11.630.1 N 0.722