fgenesh3_pg.C_scaffold_12000111 (Laccaria bicolor)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh3_pg.C_scaffold_12000111 T52317_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh3_pg.C_scaffold_12000111 RRM 148 213
fgenesh3_pg.C_scaffold_12000111 RRM 241 306
fgenesh3_pg.C_scaffold_12000111 RRM 343 409

Links

Other RRM family RBPs
Other Laccaria bicolor RBPs

3 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_20592 Pleurotus ostreatus estExt_Genewise1Plus.C_20592 N 0.735
estExt_Genewise1Plus.C_120567 Heterobasidion annosum estExt_Genewise1Plus.C_120567 N 0.729
estExt_Genewise1.C_80828 Agaricus bisporus estExt_Genewise1.C_80828 N 0.724