MDP0000213471 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000213471 T57439_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000213471 RRM 118 196

Links

Other RRM family RBPs
Other Malus x domestica RBPs

26 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa025065m Prunus persica ppa025065m N 0.886
B9MT79_POPTR Populus trichocarpa POPTR_0006s13450 N 0.810
B9IIZ2_POPTR Populus trichocarpa POPTR_0016s08560 N 0.797
cassava801.valid.m1 Manihot esculenta cassava801.valid.m1 N 0.797
cassava802.valid.m1 Manihot esculenta cassava802.valid.m1 N 0.797
ppa000664m Prunus persica ppa000664m N 0.772
LjT39B13.150.nc Lotus japonicus LjT39B13.150.nc N 0.759
cassava12926.valid.m1 Manihot esculenta cassava12926.valid.m1 N 0.759
cassava13567.valid.m1 Manihot esculenta cassava13567.valid.m1 N 0.759
B9HPP2_POPTR Populus trichocarpa POPTR_0009s03130 N 0.759
cassava12925.valid.m1 Manihot esculenta cassava12925.valid.m1 N 0.759
GSVIVG00025102001 Vitis vinifera GSVIVG00025102001 N 0.759
Cucsa.051650 Cucumis sativus Cucsa.051650 N 0.747
Glyma11g15670.1 Glycine max Glyma11g15670.1 N 0.747
MDP0000296717 Malus x domestica MDP0000296717 N 0.747
mgf016286m Mimulus guttatus mgf016286m N 0.734
Medtr2g111500 Medicago truncatula Medtr2g111500 N 0.734
PK08517.1 Cannabis sativa PK08517.1 N 0.734
Glyma15g04950.1 Glycine max Glyma15g04950.1 N 0.734
Glyma12g07790.1 Glycine max Glyma12g07790.1 N 0.734
AT3G45630 Arabidopsis thaliana AT3G45630-TAIR-G N 0.734
XM_002877379.1 Arabidopsis lyrata fgenesh2_kg.5__939__AT3G45630.1 N 0.734
Glyma13g40460.1 Glycine max Glyma13g40460.1 N 0.722
mgf016475m Mimulus guttatus mgf016475m N 0.722
AT5G60170 Arabidopsis thaliana AT5G60170-TAIR-G N 0.709
XM_002864625.1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002022 N 0.709