Medtr7g124520 (Medicago truncatula)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Medtr7g124520 T54592_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr7g124520.1 RRM 12 82
Medtr7g124520.1 RRM 100 169
Medtr7g124520.1 RRM 191 260
Medtr7g124520.1 RRM 294 363

Links

Other RRM family RBPs
Other Medicago truncatula RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma03g34580.1 Glycine max Glyma03g34580.1 N 0.836
Glyma19g37270.1 Glycine max Glyma19g37270.1 N 0.829
GSVIVG00033724001 Vitis vinifera GSVIVG00033724001 N 0.758
Glyma13g21190.1 Glycine max Glyma13g21190.1 N 0.747
cassava15018.m1 Manihot esculenta cassava15018.m1 N 0.747
Glyma10g07280.1 Glycine max Glyma10g07280.1 N 0.744
30078.m002213 Ricinus communis 30078.m002213 N 0.730
ppa020841m Prunus persica ppa020841m N 0.726
Cucsa.378900 Cucumis sativus Cucsa.378900 N 0.726
MDP0000319175 Malus x domestica MDP0000319175 N 0.707
MDP0000283466 Malus x domestica MDP0000283466 N 0.703