fgenesh1_pg.00009_#_169 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.00009_#_169 T56512_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.00009_#_169 RRM 44 114

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
An07g07690 Aspergillus niger CADANGAG00006043 N 0.986
AFLA_092480 Aspergillus flavus CADAFLAG00008933 N 0.958
ATEG_09567 Aspergillus terreus CADATEAG00004434 N 0.958
ACLA_091280 Aspergillus clavatus CADACLAG00008586 N 0.944
AO090120000261 Aspergillus oryzae CADAORAG00011410 N 0.944
NFIA_035610 Neosartorya fischeri CADNFIAG00003400 N 0.930
ANIA_04505 Aspergillus nidulans CADANIAG00005939 N 0.930
AFUA_2G03260 Aspergillus fumigatus CADAFUAG00003323 N 0.930
PMAA_055960 Penicillium marneffei PMAA_055960 N 0.915
TERG_06808 Trichophyton rubrum TERG_06808 N 0.901
TESG_05569 Trichophyton tonsurans TESG_05569 N 0.901
ARB_00312 Arthroderma benhamiae ARB_00312 N 0.901
MGYG_02725 Microsporum gypseum MGYG_02725 N 0.901
MCYG_05630 Microsporum canis MCYG_05630 N 0.901
TEQG_00651 Trichophyton equinum TEQG_00651 N 0.901
BDBG_04679 Blastomyces dermatitidis BDBG_04679 N 0.887
PABG_01051 Paracoccidioides brasiliensis PABG_01051 N 0.887
CIMG_04543 Coccidioides immitis CIMG_04543 N 0.873
Pc18g03980 Penicillium chrysogenum Pc18g03980 N 0.873
CPSG_06388 Coccidioides posadasii CPSG_06388 N 0.873
UREG_01752 Uncinocarpus reesii UREG_01752 N 0.859
fgenesh1_kg.C_scaffold_4000104 Schizophyllum commune fgenesh1_kg.C_scaffold_4000104 I 0.704
estExt_fgenesh1_kg.C_chr_10019 Mycosphaerella graminicola estExt_fgenesh1_kg.C_chr_10019 N 0.704