CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGYG_02725
(
Microsporum gypseum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGYG_02725
T29810_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGYG_02725T0
RRM
41
111
IIATNIHEEASEEDVTDLFAEYGDIKNFNLNLDRRTGYVKGYALIEYPTLPEAEAAIKALHGAKLLDQTIE
Links
Other
RRM
family RBPs
Other
Microsporum gypseum
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_00312
Arthroderma benhamiae
ARB_00312
N
1.000
TESG_05569
Trichophyton tonsurans
TESG_05569
N
1.000
TERG_06808
Trichophyton rubrum
TERG_06808
N
1.000
TEQG_00651
Trichophyton equinum
TEQG_00651
N
1.000
MCYG_05630
Microsporum canis
MCYG_05630
N
1.000
An07g07690
Aspergillus niger
CADANGAG00006043
N
0.901
fgenesh1_pg.00009_#_169
Aspergillus carbonarius
fgenesh1_pg.00009_#_169
N
0.901
AFUA_2G03260
Aspergillus fumigatus
CADAFUAG00003323
N
0.901
NFIA_035610
Neosartorya fischeri
CADNFIAG00003400
N
0.901
ACLA_091280
Aspergillus clavatus
CADACLAG00008586
N
0.887
PMAA_055960
Penicillium marneffei
PMAA_055960
N
0.887
CIMG_04543
Coccidioides immitis
CIMG_04543
N
0.887
CPSG_06388
Coccidioides posadasii
CPSG_06388
N
0.887
ANIA_04505
Aspergillus nidulans
CADANIAG00005939
N
0.887
ATEG_09567
Aspergillus terreus
CADATEAG00004434
N
0.887
BDBG_04679
Blastomyces dermatitidis
BDBG_04679
N
0.873
AFLA_092480
Aspergillus flavus
CADAFLAG00008933
N
0.873
PABG_01051
Paracoccidioides brasiliensis
PABG_01051
N
0.873
UREG_01752
Uncinocarpus reesii
UREG_01752
N
0.873
AO090120000261
Aspergillus oryzae
CADAORAG00011410
N
0.859
Pc18g03980
Penicillium chrysogenum
Pc18g03980
N
0.803
SS1G_12129
Sclerotinia sclerotiorum
SS1G_12129
N
0.732
BC1G_11068
Botrytis cinerea
BC1G_11068
N
0.732
e_gw1.4.2145.1
Cryphonectria parasitica
e_gw1.4.2145.1
N
0.718
FVEG_03573
Fusarium verticillioides
FVEG_03573
N
0.704
estExt_fgenesh1_kg.C_chr_10019
Mycosphaerella graminicola
estExt_fgenesh1_kg.C_chr_10019
N
0.704
FOXG_05707
Fusarium oxysporum
FOXG_05707
N
0.704