CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KLLA0B10472g
(
Kluyveromyces lactis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
KLLA0B10472g
T57032_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLLA0B10472g
RRM
49
119
VYVGNLSFYTSEEQIYELFSKCGTIKKIIMGLDRFKFTPCGFCFIIFDKMEDALNSIKYLGDTKLDDRHIT
Links
Other
RRM
family RBPs
Other
Kluyveromyces lactis
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZYRO0G19844g
Zygosaccharomyces rouxii
ZYRO0G19844g
N
0.831
CAGL0C01529g
Candida glabrata
CAGL0C01529g
N
0.817
21605_YPL178W
Saccharomyces mikatae
21605_YPL178W
N
0.803
A7TEB0_VANPO
Vanderwaltozyma polyspora
A7TEB0_VANPO
N
0.803
Scas_Contig720.2
Saccharomyces castellii
Scas_Contig720.2
N
0.803
SAKL0A05588g
Lachancea kluyveri
SAKL0A05588g
N
0.803
CBC2
Saccharomyces cerevisiae
YPL178W
N
0.803
Kwal_11096
Kluyveromyces waltii
Kwal_11096
N
0.789
24632_YPL178W
Saccharomyces bayanus
24632_YPL178W
N
0.789
Skud_Contig1957.10
Saccharomyces kudriavzevii
Skud_Contig1957.10
N
0.789
CBC2
Ashbya gossypii
CBC2
N
0.775
KLTH0H05214g
Kluyveromyces thermotolerans
KLTH0H05214g
N
0.761