CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KLTH0H05214g
(
Kluyveromyces thermotolerans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
KLTH0H05214g
T57114_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLTH0H05214g
RRM
48
118
IYVGNLSFYTSEEQIYELFSKSGVIKRIIMGLDRFKFTPCGFCFVIYNTPEEALDAVKYLSGTKLDDRNIS
Links
Other
RRM
family RBPs
Other
Kluyveromyces thermotolerans
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Kwal_11096
Kluyveromyces waltii
Kwal_11096
N
0.972
SAKL0A05588g
Lachancea kluyveri
SAKL0A05588g
N
0.915
A7TEB0_VANPO
Vanderwaltozyma polyspora
A7TEB0_VANPO
N
0.873
ZYRO0G19844g
Zygosaccharomyces rouxii
ZYRO0G19844g
N
0.859
CAGL0C01529g
Candida glabrata
CAGL0C01529g
N
0.859
Scas_Contig720.2
Saccharomyces castellii
Scas_Contig720.2
N
0.831
21605_YPL178W
Saccharomyces mikatae
21605_YPL178W
N
0.831
24632_YPL178W
Saccharomyces bayanus
24632_YPL178W
N
0.817
CBC2
Saccharomyces cerevisiae
YPL178W
N
0.817
CBC2
Ashbya gossypii
CBC2
N
0.817
Skud_Contig1957.10
Saccharomyces kudriavzevii
Skud_Contig1957.10
N
0.803
KLLA0B10472g
Kluyveromyces lactis
KLLA0B10472g
N
0.761
e_gw1.17.191.1
Trichoderma reesei
e_gw1.17.191.1
N
0.732
SJAG_01064
Schizosaccharomyces japonicus
SJAG_01064
N
0.718
XP_002160076.1
Hydra magnipapillata
XP_002160076.1
N
0.718
e_gw1.3.1174.1
Thielavia terrestris
e_gw1.3.1174.1
N
0.718
e_gw1.10.746.1
Trichoderma virens
e_gw1.10.746.1
N
0.718
FVEG_07036
Fusarium verticillioides
FVEG_07036
N
0.704
GLRG_00177
Colletotrichum graminicola
GLRG_00177
N
0.704
BC1G_04395
Botrytis cinerea
BC1G_04395
N
0.704
fgenesh1_pg.C_scaffold_1000747
Cryphonectria parasitica
fgenesh1_pg.C_scaffold_1000747
N
0.704
GSTUMT00010626001
Tuber melanosporum
GSTUMT00010626001
N
0.704
PTRG_00402
Pyrenophora tritici repentis
PTRG_00402
N
0.704
XP_002166119.1
Hydra magnipapillata
XP_002166119.1
N
0.704
SNOG_09598
Stagonospora nodorum
SNOG_09598
N
0.704
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
Nectria haematococca
estExt_fgenesh1_kg.C_sca_10_chr8_2_00014
N
0.704
SPPG_00516
Spizellomyces punctatus
SPPG_00516
N
0.704
estExt_Genewise1.C_10147
Cochliobolus heterostrophus C5
estExt_Genewise1.C_10147
N
0.704
estExt_Genewise1Plus.C_40730
Myceliophthora thermophila
estExt_Genewise1Plus.C_40730
N
0.704
EAT82863.2
Phaeosphaeria nodorum
EAT82863.2
N
0.704
gw1.29.143.1
Phycomyces blakesleeanus
gw1.29.143.1
N
0.704
SS1G_13629
Sclerotinia sclerotiorum
SS1G_13629
N
0.704