gw1.16.255.1 (Trichoderma reesei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.16.255.1 T53129_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.16.255.1 RRM 16 86

Links

Other RRM family RBPs
Other Trichoderma reesei RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.944
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.944
NCU02467 Neurospora crassa NCU02467 N 0.930
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.930
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.930
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.930
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.915
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.915
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.887
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.873
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.873
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.873
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.859
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.859
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.845
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.845
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.845
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.831
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.831
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.831
An07g05140 Aspergillus niger CADANGAG00005786 N 0.817
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.817
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.817
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.817
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.817
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.817
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.803
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.803
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.789
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.789
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.789
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.789
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.789
TERG_07863 Trichophyton rubrum TERG_07863 N 0.789
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.789
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.789
MCYG_01624 Microsporum canis MCYG_01624 N 0.789
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.775
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.775
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.775
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.775
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.775
AB08288.1 Alternaria brassicicola AB08288.1 N 0.761
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.761
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.761
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.761
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.761
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.746
SAKL0F04400g Lachancea kluyveri SAKL0F04400g N 0.718
Kwal_20972 Kluyveromyces waltii Kwal_20972 N 0.718
DGIL_AUG5s13597g2t1 Acyrtosiphon pisum DGIL_AUG5s13597g2t1 N 0.704
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.704
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.704
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.704