Pa_1_22200 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_1_22200 T57905_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_1_22200 RRM 57 127

Links

Other RRM family RBPs
Other Podospora anserina RBPs

55 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.944
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.930
NCU02467 Neurospora crassa NCU02467 N 0.930
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.930
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.915
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.915
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.901
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.901
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.901
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.887
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.887
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.887
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.845
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.831
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.831
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.831
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.817
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.817
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.803
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.789
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.775
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.775
AB08288.1 Alternaria brassicicola AB08288.1 N 0.775
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.775
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.775
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.775
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.775
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.761
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.761
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.746
An07g05140 Aspergillus niger CADANGAG00005786 N 0.746
SAKL0F04400g Lachancea kluyveri SAKL0F04400g N 0.746
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.746
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.746
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.732
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.732
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.732
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.732
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.718
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.718
KLLA0D13420g Kluyveromyces lactis KLLA0D13420g N 0.718
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.718
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.718
fgenesh1_pg.00771_#_290 Aspergillus carbonarius fgenesh1_pg.00771_#_290 N 0.718
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.718
MCYG_01624 Microsporum canis MCYG_01624 N 0.718
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.718
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.718
estExt_fgenesh1_pg.C_30395 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_30395 N 0.718
TERG_07863 Trichophyton rubrum TERG_07863 N 0.718
Kwal_20972 Kluyveromyces waltii Kwal_20972 N 0.704
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.704
RBMX2 Sorex araneus ENSSARG00000007350 N 0.704
gw1.462.53.1 Capitella teleta gw1.462.53.1 N 0.704
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.704