CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MDP0000131956
(
Malus x domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MDP0000131956
T57326_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000131956
RRM
119
189
VYLGGIPHDASEVDLRGFCESIGEVTEVRIMKGKDSGEAKGYAFVTFRNKELASKAIEELNNSELKGKRIK
MDP0000131956
RRM
199
269
LFIGNVPRSWGEEDMKKAVTDIGPGVISVELLKDPQNSSRNRGFAFIEYYNHACAEYSRQKMSTPKFKLDT
MDP0000131956
RRM
293
320
VYVKNLPKDITQDQLKDLFEHHGKINKX
Links
Other
RRM
family RBPs
Other
Malus x domestica
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MDP0000851531
Malus x domestica
MDP0000851531
N
0.789
MDP0000181657
Malus x domestica
MDP0000181657
N
0.779
ppa004785m
Prunus persica
ppa004785m
N
0.756