MDP0000181657 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000181657 T57396_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000181657 RRM 118 188
MDP0000181657 RRM 198 268
MDP0000181657 RRM 292 362

Links

Other RRM family RBPs
Other Malus x domestica RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000851531 Malus x domestica MDP0000851531 N 0.991
ppa004785m Prunus persica ppa004785m N 0.962
cassava21693.m1 Manihot esculenta cassava21693.m1 N 0.883
cassava19191.valid.m1 Manihot esculenta cassava19191.valid.m1 N 0.883
cassava21692.m1 Manihot esculenta cassava21692.m1 N 0.883
PK04414.1 Cannabis sativa PK04414.1 N 0.878
cassava19192.valid.m1 Manihot esculenta cassava19192.valid.m1 N 0.869
cassava29630.valid.m1 Manihot esculenta cassava29630.valid.m1 N 0.869
GSVIVG00036119001 Vitis vinifera GSVIVG00036119001 N 0.841
B9IIU5_POPTR Populus trichocarpa POPTR_0016s08010 N 0.840
B9HC85_POPTR Populus trichocarpa POPTR_0006s22890 N 0.836
mgf001576m Mimulus guttatus mgf001576m N 0.831
Glyma03g35450.1 Glycine max Glyma03g35450.1 N 0.831
28629.m000549 Ricinus communis 28629.m000549 N 0.817
GSVIVG00033857001 Vitis vinifera GSVIVG00033857001 N 0.804
PK05405.1 Cannabis sativa PK05405.1 N 0.793
PDK_20s1316982g002 Phoenix dactylifera PDK_20s1316982g002 N 0.789
Cucsa.185730 Cucumis sativus Cucsa.185730 N 0.789
MDP0000131956 Malus x domestica MDP0000131956 N 0.779
chr1.CM0010.50.nc Lotus japonicus chr1.CM0010.50.nc N 0.779
ppa004677m Prunus persica ppa004677m N 0.775
Medtr7g127590 Medicago truncatula Medtr7g127590 N 0.775
30055.m001569 Ricinus communis 30055.m001569 N 0.756
Glyma12g09530.1 Glycine max Glyma12g09530.1 N 0.751
Glyma11g18940.1 Glycine max Glyma11g18940.1 N 0.751
MDP0000250854 Malus x domestica MDP0000250854 N 0.742
XM_002876116.1 Arabidopsis lyrata fgenesh2_kg.5__1629__AT3G52660.1 N 0.721
B9HQ12_POPTR Populus trichocarpa POPTR_0009s16490 N 0.718
AT3G52660 Arabidopsis thaliana AT3G52660-TAIR-G N 0.716
Medtr7g009690 Medicago truncatula Medtr7g009690 N 0.714
B9MYW2_POPTR Populus trichocarpa POPTR_0004s21210 N 0.709