MDP0000193642 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000193642 T57417_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000193642 RRM 11 81

Links

Other RRM family RBPs
Other Malus x domestica RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000319973 Malus x domestica MDP0000319973 N 1.000
MDP0000219767 Malus x domestica MDP0000219767 N 0.986
Medtr5g047590 Medicago truncatula Medtr5g047590 N 0.986
Glyma02g13280.1 Glycine max Glyma02g13280.1 N 0.986
MDP0000271129 Malus x domestica MDP0000271129 N 0.986
MDP0000588137 Malus x domestica MDP0000588137 N 0.986
ppa012381m Prunus persica ppa012381m N 0.972
Cucsa.327930 Cucumis sativus Cucsa.327930 N 0.972
GSVIVG00010778001 Vitis vinifera GSVIVG00010778001 N 0.972
Glyma01g07800.1 Glycine max Glyma01g07800.1 N 0.958
cassava7442.valid.m1 Manihot esculenta cassava7442.valid.m1 N 0.958
ATE1 Arabidopsis thaliana AT1G13690-TAIR-G N 0.958
B9HIG1_POPTR Populus trichocarpa POPTR_0008s09710 N 0.958
XM_002889971.1 Arabidopsis lyrata fgenesh2_kg.1__1483__AT1G13690.1 N 0.958
30174.m009088 Ricinus communis 30174.m009088 N 0.944
BGIOSIBCE012002 Oryza indica BGIOSIBCE012002 N 0.930
LOC_Os03g40310 Oryza sativa LOC_Os03g40310 N 0.930
B9HXI2_POPTR Populus trichocarpa POPTR_0010s16450 N 0.915
BRADI1G15040 Brachypodium distachyon BRADI1G15040 N 0.915
GRMZM2G138572 Zea mays GRMZM2G138572 N 0.901
SB01G015060 Sorghum bicolor Sb01g015060 N 0.901
estExt_Genewise1.C_40283 Selaginella moellendorfii estExt_Genewise1.C_40283 N 0.789
PK11881.1 Cannabis sativa PK11881.1 N 0.718
fgenesh1_pm.scaffold_10000011 Physcomitrella patens fgenesh1_pm.scaffold_10000011 N 0.708
estExt_Genewise1Plus.C_190263 Chlorella vulgaris estExt_Genewise1Plus.C_190263 N 0.704
fgenesh1_pg.scaffold_18000061 Physcomitrella patens fgenesh1_pg.scaffold_18000061 N 0.704
estExt_Genemark1.C_190214 Coccomyxa C 169 estExt_Genemark1.C_190214 N 0.704