PDK_20s1512141g001 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1512141g001 T58173_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1512141g001 RRM 1 51
PDK_20s1512141g001 RRM 75 146
PDK_20s1512141g001 RRM 176 240

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G467907 Zea mays GRMZM2G467907 I 0.773
GRMZM2G168163 Zea mays GRMZM2G168163 I 0.763
BGIOSIBCE030235 Oryza indica BGIOSIBCE030235 N 0.756
BRADI4G32380 Brachypodium distachyon BRADI4G32380 N 0.749
LOC_Os09g28810 Oryza sativa LOC_Os09g28810 I 0.744
Sb02g026820 Sorghum bicolor Sb02g026820 I 0.739
MDP0000262005 Malus x domestica MDP0000262005 N 0.713
MDP0000142206 Malus x domestica MDP0000142206 N 0.707
GSVIVG00009558001 Vitis vinifera GSVIVG00009558001 I 0.702