MDP0000262005 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000262005 T57525_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000262005 RRM 1605 1655
MDP0000262005 RRM 1679 1750
MDP0000262005 RRM 1822 1886

Links

Other RRM family RBPs
Other Malus x domestica RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000142206 Malus x domestica MDP0000142206 N 0.941
ppa005661m Prunus persica ppa005661m I 0.821
PK15272.1 Cannabis sativa PK15272.1 I 0.744
Glyma02g15190.1 Glycine max Glyma02g15190.1 I 0.734
Glyma07g33300.1 Glycine max Glyma07g33300.1 I 0.734
GSVIVG00031780001 Vitis vinifera GSVIVG00031780001 I 0.734
B9N4W3_POPTR Populus trichocarpa POPTR_0004s15080 I 0.715
chr4.CM0079.170.nc Lotus japonicus chr4.CM0079.170.nc I 0.715
PDK_20s1512141g001 Phoenix dactylifera PDK_20s1512141g001 N 0.713
cassava1152.valid.m1 Manihot esculenta cassava1152.valid.m1 I 0.710
GSVIVG00009558001 Vitis vinifera GSVIVG00009558001 I 0.707
B9HRX8_POPTR Populus trichocarpa POPTR_0009s10820 I 0.705
29801.m003218 Ricinus communis 29801.m003218 I 0.705
ATRBP47B Arabidopsis thaliana AT3G19130-TAIR-G I 0.700
Medtr4g129250 Medicago truncatula Medtr4g129250 I 0.700