CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AGAP002121
(
Anopheles gambiae
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
AGAP002121
T60123_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP002121-PA
S1
78
159
RPFKGEVLDATVKQVNKVGMFAEIGPLSCFISHHSIPADMQFCPNGAPPCYRAINGESVIAAEDKIRLKIVGTRVDATGIFA
Links
Other
S1
family RBPs
Other
Anopheles gambiae
RBPs
21 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CPIJ001219
Culex quinquefasciatus
CPIJ001219
N
0.866
CpipJ_CPIJ001219
Culex pipiens
CpipJ_CPIJ001219
N
0.866
GD20374
Drosophila simulans
FBgn0191847
N
0.854
GK11212
Drosophila willistoni
FBgn0213223
N
0.854
GA27654-RA
Drosophila pseudoobscura
FBgn0249019
N
0.854
AAEL003401
Aedes aegypti
AAEL003401
N
0.854
GM25797
Drosophila sechellia
FBgn0180653
N
0.854
GE26402
Drosophila yakuba
FBgn0243428
N
0.854
GJ23373
Drosophila virilis
FBgn0210474
N
0.854
GL12210
Drosophila persimilis
FBgn0149817
N
0.854
GA16051-RA
Drosophila pseudoobscura
FBgn0076067
N
0.854
Rpb7
Drosophila melanogaster
FBgn0051155
N
0.854
GF11824
Drosophila ananassae
FBgn0088864
N
0.854
GG20814
Drosophila erecta
FBgn0113000
N
0.854
GI22645
Drosophila mojavensis
FBgn0145373
N
0.854
GH18755
Drosophila grimshawi
FBgn0126222
N
0.854
nasonia_NCBI_hmm304924
Nasonia vitripennis
nasonia_NCBI_hmm304924
N
0.817
PHUM079870
Pediculus humanus
PHUM079870
N
0.817
amel4_ncbi_hmm13760
Apis mellifera
amel4_ncbi_hmm13760
N
0.805
amel4_ncbi_hmm13760
Tribolium castaneum
amel4_ncbi_hmm13760
N
0.805
DGIL_AUG5s10638g4t1
Acyrtosiphon pisum
DGIL_AUG5s10638g4t1
N
0.744