ENSCING00000001546 (Ciona intestinalis)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 ENSCING00000001546 T60284_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000003057 S1 6 81
ENSCINP00000003063 S1 201 276

Links

Other S1 family RBPs
Other Ciona intestinalis RBPs

43 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DHX8 Gorilla gorilla ENSGGOG00000000143 N 0.816
ENSPPYG00000008357 Pongo pygmaeus ENSPPYG00000008357 N 0.803
DHX8 Macaca mulatta ENSMMUG00000012071 N 0.803
DHX8 Homo sapiens ENSG00000067596 N 0.803
LOC100394123 Callithrix jacchus ENSCJAG00000010659 N 0.803
DHX8 Pan troglodytes ENSPTRG00000009246 N 0.803
DHX8 Ochotona princeps ENSOPRG00000014865 N 0.789
DHX8 Pteropus vampyrus ENSPVAG00000014872 N 0.789
Dhx8 Mus musculus ENSMUSG00000034931 N 0.789
Dhx8 Rattus norvegicus ENSRNOG00000020772 N 0.789
DHX8 Bos taurus ENSBTAG00000008339 N 0.789
DHX8 Canis familiaris ENSCAFG00000014556 N 0.789
Ame_R007841 Ailuropoda melanoleuca Ame_R007841 N 0.789
DHX8 Vicugna pacos ENSVPAG00000004605 N 0.789
DHX8 Tarsius syrichta ENSTSYG00000008782 N 0.789
DHX8 Sus scrofa ENSSSCG00000017378 N 0.789
DHX8 Oryctolagus cuniculus ENSOCUG00000008014 N 0.789
Dhx8 Dipodomys ordii ENSDORG00000013845 N 0.789
ENSMLUG00000014389 Myotis lucifugus ENSMLUG00000014389 N 0.789
DHX8 Felis catus ENSFCAG00000009908 N 0.789
DHX8 Loxodonta africana ENSLAFG00000022159 N 0.789
DHX8 Cavia porcellus ENSCPOG00000000224 N 0.789
DHX8 Myotis lucifugus ENSMLUG00000000090 N 0.789
LOC100051804 Equus caballus ENSECAG00000019601 N 0.789
DHX8 Anolis carolinensis ENSACAG00000013509 N 0.776
DHX8 Echinops telfairi ENSETEG00000010986 N 0.776
DHX8 Tursiops truncatus ENSTTRG00000016056 N 0.776
DHX8 Taeniopygia guttata ENSTGUG00000002881 N 0.776
DHX8 Monodelphis domestica ENSMODG00000015181 N 0.776
LOC425433 Gallus gallus ENSGALG00000008448 N 0.776
LOC771596 Gallus gallus ENSGALG00000001186 N 0.776
DHX8 Danio rerio ENSDARG00000054707 N 0.763
DHX8 Takifugu rubripes ENSTRUG00000002454 N 0.763
dhx8 Xenopus tropicalis ENSXETG00000013672 N 0.763
DHX8 Gasterosteus aculeatus ENSGACG00000003750 N 0.763
ENSGACG00000003736 Gasterosteus aculeatus ENSGACG00000003736 N 0.750
AAH73477 Xenopus laevis AAH73477 N 0.750
DHX8 Dasypus novemcinctus ENSDNOG00000013606 N 0.750
DHX8 Oryzias latipes ENSORLG00000011951 N 0.750
ENSTRUG00000004063 Takifugu rubripes ENSTRUG00000004063 N 0.724
ENSTNIG00000002771 Tetraodon nigroviridis ENSTNIG00000002771 N 0.724
DHX8 Sorex araneus ENSSARG00000007300 N 0.711