CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DHX8
(
Oryzias latipes
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSORLG00000011951
T60487_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000014975
S1
240
315
EPSVGDIYNGKITSIMQFGCFVQLEGLRSRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMK
Links
Other
S1
family RBPs
Other
Oryzias latipes
RBPs
47 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC425433
Gallus gallus
ENSGALG00000008448
N
0.961
DHX8
Anolis carolinensis
ENSACAG00000013509
N
0.961
DHX8
Gasterosteus aculeatus
ENSGACG00000003750
N
0.961
DHX8
Danio rerio
ENSDARG00000054707
N
0.961
DHX8
Taeniopygia guttata
ENSTGUG00000002881
N
0.961
LOC771596
Gallus gallus
ENSGALG00000001186
N
0.961
DHX8
Ochotona princeps
ENSOPRG00000014865
N
0.934
Dhx8
Dipodomys ordii
ENSDORG00000013845
N
0.934
DHX8
Cavia porcellus
ENSCPOG00000000224
N
0.934
LOC100394123
Callithrix jacchus
ENSCJAG00000010659
N
0.934
DHX8
Bos taurus
ENSBTAG00000008339
N
0.934
ENSPPYG00000008357
Pongo pygmaeus
ENSPPYG00000008357
N
0.934
LOC100051804
Equus caballus
ENSECAG00000019601
N
0.934
DHX8
Felis catus
ENSFCAG00000009908
N
0.934
DHX8
Loxodonta africana
ENSLAFG00000022159
N
0.934
DHX8
Myotis lucifugus
ENSMLUG00000000090
N
0.934
DHX8
Monodelphis domestica
ENSMODG00000015181
N
0.934
Dhx8
Mus musculus
ENSMUSG00000034931
N
0.934
DHX8
Homo sapiens
ENSG00000067596
N
0.934
DHX8
Oryctolagus cuniculus
ENSOCUG00000008014
N
0.934
DHX8
Macaca mulatta
ENSMMUG00000012071
N
0.934
DHX8
Canis familiaris
ENSCAFG00000014556
N
0.934
DHX8
Tarsius syrichta
ENSTSYG00000008782
N
0.934
DHX8
Takifugu rubripes
ENSTRUG00000002454
N
0.934
DHX8
Vicugna pacos
ENSVPAG00000004605
N
0.934
Ame_R007841
Ailuropoda melanoleuca
Ame_R007841
N
0.934
DHX8
Sus scrofa
ENSSSCG00000017378
N
0.934
DHX8
Pan troglodytes
ENSPTRG00000009246
N
0.934
DHX8
Pteropus vampyrus
ENSPVAG00000014872
N
0.934
Dhx8
Rattus norvegicus
ENSRNOG00000020772
N
0.934
dhx8
Xenopus tropicalis
ENSXETG00000013672
N
0.921
DHX8
Echinops telfairi
ENSETEG00000010986
N
0.921
DHX8
Tursiops truncatus
ENSTTRG00000016056
N
0.921
DHX8
Gorilla gorilla
ENSGGOG00000000143
N
0.921
ENSMLUG00000014389
Myotis lucifugus
ENSMLUG00000014389
N
0.908
AAH73477
Xenopus laevis
AAH73477
N
0.908
DHX8
Dasypus novemcinctus
ENSDNOG00000013606
N
0.882
ENSGACG00000003736
Gasterosteus aculeatus
ENSGACG00000003736
N
0.868
DHX8
Sorex araneus
ENSSARG00000007300
N
0.829
ISCW002555
Ixodes scapularis
ISCW002555
N
0.816
ENSTRUG00000004063
Takifugu rubripes
ENSTRUG00000004063
N
0.816
ENSTNIG00000002771
Tetraodon nigroviridis
ENSTNIG00000002771
N
0.789
ENSCING00000001546
Ciona intestinalis
ENSCING00000001546
N
0.750
XP_001193417.1
Strongylocentrotus purpuratus
XP_001193417.1
N
0.737
XP_799263.2
Strongylocentrotus purpuratus
XP_799263.2
N
0.737
189215
Helobdella robusta
189215
N
0.724
PHUM299460
Pediculus humanus
PHUM299460
N
0.713