CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC17
(
Ochotona princeps
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSOPRG00000014449
T60478_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000013186
S1
1
65
VAMVTDYGAFIKIPGCRKQGLVHRSHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRVKVSLSM
Links
Other
S1
family RBPs
Other
Ochotona princeps
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ZCCHC17
Homo sapiens
ENSG00000121766
N
0.923
LOC100409512
Callithrix jacchus
ENSCJAG00000006259
N
0.923
ZCCHC17
Macaca mulatta
ENSMMUG00000012156
N
0.923
ZCCHC17
Gorilla gorilla
ENSGGOG00000009126
N
0.923
ENSCPOG00000000106
Cavia porcellus
ENSCPOG00000000106
N
0.861
ENSCPOG00000022394
Cavia porcellus
ENSCPOG00000022394
N
0.847
ZCCHC17
Loxodonta africana
ENSLAFG00000015364
N
0.829
LOC100056288
Equus caballus
ENSECAG00000025040
N
0.827
ENSOCUG00000014599
Oryctolagus cuniculus
ENSOCUG00000014599
N
0.827
ZCCHC17
Echinops telfairi
ENSETEG00000007421
N
0.827
ZCCHC17
Felis catus
ENSFCAG00000004196
N
0.827
ZCCHC17
Microcebus murinus
ENSMICG00000009354
N
0.827
ENSPPYG00000001617
Pongo pygmaeus
ENSPPYG00000001617
N
0.827
Zcchc17
Mus musculus
ENSMUSG00000028772
N
0.827
ZCCHC17
Myotis lucifugus
ENSMLUG00000000594
N
0.827
Zcchc17
Dipodomys ordii
ENSDORG00000004128
N
0.827
ZCCHC17
Tarsius syrichta
ENSTSYG00000000490
N
0.827
Zcchc17
Rattus norvegicus
ENSRNOG00000012266
N
0.827
ZCCHC17
Pteropus vampyrus
ENSPVAG00000014747
N
0.827
ZCCHC17
Pan troglodytes
ENSPTRG00000000456
N
0.827
ZCCHC17
Tursiops truncatus
ENSTTRG00000014870
N
0.827
XM_535332.2
Canis familiaris
ENSCAFG00000011131
N
0.827
ZCCHC17
Vicugna pacos
ENSVPAG00000003834
N
0.827
Q3T0H4_BOVIN
Bos taurus
ENSBTAG00000016818
N
0.827
XP_001381726.1
Monodelphis domestica
ENSMODG00000017082
N
0.806
ENSCAFG00000001857
Canis familiaris
ENSCAFG00000001857
N
0.800
LOC616011
Bos taurus
ENSBTAG00000001432
N
0.800
ZCCHC17
Erinaceus europaeus
ENSEEUG00000014855
N
0.747
ENSMODG00000025345
Monodelphis domestica
ENSMODG00000025345
N
0.746
ENSOCUG00000027238
Oryctolagus cuniculus
ENSOCUG00000027238
N
0.733
ZCCHC17
Taeniopygia guttata
ENSTGUG00000000817
N
0.727
ZCCHC17
Meleagris gallopavo
ENSMGAG00000000777
N
0.701