CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMODG00000025345
(
Monodelphis domestica
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSMODG00000025345
T60449_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000037782
S1
9
78
TIFREEVVTVTEYGVFIKSPGCRKQGLVHWTHMSSCRVDKPSYIVDVGDKVWVKLIGQEMKNDKVKLSLS
Links
Other
S1
family RBPs
Other
Monodelphis domestica
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XP_001381726.1
Monodelphis domestica
ENSMODG00000017082
N
0.901
ENSCPOG00000000106
Cavia porcellus
ENSCPOG00000000106
N
0.803
ENSCPOG00000022394
Cavia porcellus
ENSCPOG00000022394
N
0.789
ZCCHC17
Echinops telfairi
ENSETEG00000007421
N
0.770
LOC100056288
Equus caballus
ENSECAG00000025040
N
0.770
ENSPPYG00000001617
Pongo pygmaeus
ENSPPYG00000001617
N
0.770
Zcchc17
Mus musculus
ENSMUSG00000028772
N
0.770
ZCCHC17
Felis catus
ENSFCAG00000004196
N
0.770
ZCCHC17
Homo sapiens
ENSG00000121766
N
0.770
ENSOCUG00000014599
Oryctolagus cuniculus
ENSOCUG00000014599
N
0.770
ZCCHC17
Macaca mulatta
ENSMMUG00000012156
N
0.770
ZCCHC17
Myotis lucifugus
ENSMLUG00000000594
N
0.770
ZCCHC17
Microcebus murinus
ENSMICG00000009354
N
0.770
LOC100409512
Callithrix jacchus
ENSCJAG00000006259
N
0.770
Zcchc17
Dipodomys ordii
ENSDORG00000004128
N
0.770
ZCCHC17
Vicugna pacos
ENSVPAG00000003834
N
0.770
ZCCHC17
Tursiops truncatus
ENSTTRG00000014870
N
0.770
XM_535332.2
Canis familiaris
ENSCAFG00000011131
N
0.770
ZCCHC17
Tarsius syrichta
ENSTSYG00000000490
N
0.770
Zcchc17
Rattus norvegicus
ENSRNOG00000012266
N
0.770
ZCCHC17
Pteropus vampyrus
ENSPVAG00000014747
N
0.770
ZCCHC17
Pan troglodytes
ENSPTRG00000000456
N
0.770
Q3T0H4_BOVIN
Bos taurus
ENSBTAG00000016818
N
0.770
XM_001381689.1
Monodelphis domestica
ENSMODG00000020372
N
0.761
ZCCHC17
Loxodonta africana
ENSLAFG00000015364
N
0.750
Q6R2T1_CHICK
Gallus gallus
ENSGALG00000000618
N
0.747
ZCCHC17
Ochotona princeps
ENSOPRG00000014449
N
0.746
ENSCAFG00000001857
Canis familiaris
ENSCAFG00000001857
N
0.743
LOC616011
Bos taurus
ENSBTAG00000001432
N
0.743
ZCCHC17
Gorilla gorilla
ENSGGOG00000009126
N
0.743
ZCCHC17
Meleagris gallopavo
ENSMGAG00000000777
N
0.727
ZCCHC17
Erinaceus europaeus
ENSEEUG00000014855
N
0.703