CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC17
(
Erinaceus europaeus
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSEEUG00000014855
T60346_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000013553
S1
13
85
PALYTIFQGEVAMVTDYGAFIKIPGCRKQALVHTHMSSGCVDQPLEIVDVGDKVWVKLIGREMKNDRIKVSLS
Links
Other
S1
family RBPs
Other
Erinaceus europaeus
RBPs
35 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Zcchc17
Rattus norvegicus
ENSRNOG00000012266
N
0.919
ZCCHC17
Tarsius syrichta
ENSTSYG00000000490
N
0.919
ZCCHC17
Pteropus vampyrus
ENSPVAG00000014747
N
0.919
ZCCHC17
Pan troglodytes
ENSPTRG00000000456
N
0.919
ZCCHC17
Echinops telfairi
ENSETEG00000007421
N
0.919
ZCCHC17
Tursiops truncatus
ENSTTRG00000014870
N
0.919
ZCCHC17
Vicugna pacos
ENSVPAG00000003834
N
0.919
Zcchc17
Dipodomys ordii
ENSDORG00000004128
N
0.919
LOC100056288
Equus caballus
ENSECAG00000025040
N
0.919
LOC100409512
Callithrix jacchus
ENSCJAG00000006259
N
0.919
XM_535332.2
Canis familiaris
ENSCAFG00000011131
N
0.919
Q3T0H4_BOVIN
Bos taurus
ENSBTAG00000016818
N
0.919
ENSOCUG00000014599
Oryctolagus cuniculus
ENSOCUG00000014599
N
0.919
ENSPPYG00000001617
Pongo pygmaeus
ENSPPYG00000001617
N
0.919
ZCCHC17
Macaca mulatta
ENSMMUG00000012156
N
0.919
ZCCHC17
Myotis lucifugus
ENSMLUG00000000594
N
0.919
ZCCHC17
Felis catus
ENSFCAG00000004196
N
0.919
ZCCHC17
Homo sapiens
ENSG00000121766
N
0.919
ZCCHC17
Microcebus murinus
ENSMICG00000009354
N
0.919
Zcchc17
Mus musculus
ENSMUSG00000028772
N
0.919
ENSCAFG00000001857
Canis familiaris
ENSCAFG00000001857
N
0.892
LOC616011
Bos taurus
ENSBTAG00000001432
N
0.892
ZCCHC17
Loxodonta africana
ENSLAFG00000015364
N
0.882
ENSCPOG00000000106
Cavia porcellus
ENSCPOG00000000106
N
0.878
ENSCPOG00000022394
Cavia porcellus
ENSCPOG00000022394
N
0.865
ENSOCUG00000027238
Oryctolagus cuniculus
ENSOCUG00000027238
N
0.838
ZCCHC17
Procavia capensis
ENSPCAG00000011665
N
0.797
XP_001381726.1
Monodelphis domestica
ENSMODG00000017082
N
0.784
ZCCHC17
Choloepus hoffmanni
ENSCHOG00000001581
N
0.770
Q6R2T1_CHICK
Gallus gallus
ENSGALG00000000618
N
0.760
ZCCHC17
Gorilla gorilla
ENSGGOG00000009126
N
0.757
ZCCHC17
Ochotona princeps
ENSOPRG00000014449
N
0.747
ZCCHC17
Meleagris gallopavo
ENSMGAG00000000777
N
0.740
ENSMODG00000025345
Monodelphis domestica
ENSMODG00000025345
N
0.703
zcchc17
Xenopus tropicalis
ENSXETG00000012917
N
0.701