CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC17
(
Procavia capensis
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSPCAG00000011665
T60495_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000010864
S1
13
86
PALYTIFQGEVAMVTDYGAFXXXXXXXXXXLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLS
Links
Other
S1
family RBPs
Other
Procavia capensis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100056288
Equus caballus
ENSECAG00000025040
N
0.865
Zcchc17
Dipodomys ordii
ENSDORG00000004128
N
0.865
ENSPPYG00000001617
Pongo pygmaeus
ENSPPYG00000001617
N
0.865
LOC100409512
Callithrix jacchus
ENSCJAG00000006259
N
0.865
Zcchc17
Mus musculus
ENSMUSG00000028772
N
0.865
ZCCHC17
Echinops telfairi
ENSETEG00000007421
N
0.865
ZCCHC17
Microcebus murinus
ENSMICG00000009354
N
0.865
ZCCHC17
Macaca mulatta
ENSMMUG00000012156
N
0.865
ZCCHC17
Homo sapiens
ENSG00000121766
N
0.865
ZCCHC17
Felis catus
ENSFCAG00000004196
N
0.865
ZCCHC17
Myotis lucifugus
ENSMLUG00000000594
N
0.865
ENSOCUG00000014599
Oryctolagus cuniculus
ENSOCUG00000014599
N
0.865
ZCCHC17
Tarsius syrichta
ENSTSYG00000000490
N
0.865
Zcchc17
Rattus norvegicus
ENSRNOG00000012266
N
0.865
ZCCHC17
Pteropus vampyrus
ENSPVAG00000014747
N
0.865
ZCCHC17
Pan troglodytes
ENSPTRG00000000456
N
0.865
ZCCHC17
Tursiops truncatus
ENSTTRG00000014870
N
0.865
ZCCHC17
Vicugna pacos
ENSVPAG00000003834
N
0.865
XM_535332.2
Canis familiaris
ENSCAFG00000011131
N
0.865
Q3T0H4_BOVIN
Bos taurus
ENSBTAG00000016818
N
0.865
ENSCAFG00000001857
Canis familiaris
ENSCAFG00000001857
N
0.851
LOC616011
Bos taurus
ENSBTAG00000001432
N
0.838
ZCCHC17
Loxodonta africana
ENSLAFG00000015364
N
0.829
ENSCPOG00000000106
Cavia porcellus
ENSCPOG00000000106
N
0.824
ENSCPOG00000022394
Cavia porcellus
ENSCPOG00000022394
N
0.811
ZCCHC17
Erinaceus europaeus
ENSEEUG00000014855
N
0.797
ENSOCUG00000027238
Oryctolagus cuniculus
ENSOCUG00000027238
N
0.757
XP_001381726.1
Monodelphis domestica
ENSMODG00000017082
N
0.730
ZCCHC17
Choloepus hoffmanni
ENSCHOG00000001581
N
0.716
ZCCHC17
Gorilla gorilla
ENSGGOG00000009126
N
0.703