CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZCCHC17
(
Choloepus hoffmanni
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSCHOG00000001581
T60274_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000001399
S1
13
78
PALYTIFQGEVAMVTDYGAFIKIPGCRKQGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREXXX
Links
Other
S1
family RBPs
Other
Choloepus hoffmanni
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Zcchc17
Mus musculus
ENSMUSG00000028772
N
0.851
ENSOCUG00000014599
Oryctolagus cuniculus
ENSOCUG00000014599
N
0.851
Q3T0H4_BOVIN
Bos taurus
ENSBTAG00000016818
N
0.851
LOC100409512
Callithrix jacchus
ENSCJAG00000006259
N
0.851
ZCCHC17
Macaca mulatta
ENSMMUG00000012156
N
0.851
ENSPPYG00000001617
Pongo pygmaeus
ENSPPYG00000001617
N
0.851
ZCCHC17
Pan troglodytes
ENSPTRG00000000456
N
0.851
ZCCHC17
Tursiops truncatus
ENSTTRG00000014870
N
0.851
ZCCHC17
Tarsius syrichta
ENSTSYG00000000490
N
0.851
Zcchc17
Rattus norvegicus
ENSRNOG00000012266
N
0.851
ZCCHC17
Pteropus vampyrus
ENSPVAG00000014747
N
0.851
ZCCHC17
Vicugna pacos
ENSVPAG00000003834
N
0.851
ZCCHC17
Myotis lucifugus
ENSMLUG00000000594
N
0.851
ZCCHC17
Echinops telfairi
ENSETEG00000007421
N
0.851
LOC100056288
Equus caballus
ENSECAG00000025040
N
0.851
Zcchc17
Dipodomys ordii
ENSDORG00000004128
N
0.851
ZCCHC17
Microcebus murinus
ENSMICG00000009354
N
0.851
ZCCHC17
Felis catus
ENSFCAG00000004196
N
0.851
ZCCHC17
Homo sapiens
ENSG00000121766
N
0.851
XM_535332.2
Canis familiaris
ENSCAFG00000011131
N
0.851
LOC616011
Bos taurus
ENSBTAG00000001432
N
0.838
ZCCHC17
Loxodonta africana
ENSLAFG00000015364
N
0.829
ENSCAFG00000001857
Canis familiaris
ENSCAFG00000001857
N
0.824
ENSCPOG00000000106
Cavia porcellus
ENSCPOG00000000106
N
0.811
ENSCPOG00000022394
Cavia porcellus
ENSCPOG00000022394
N
0.797
ENSOCUG00000027238
Oryctolagus cuniculus
ENSOCUG00000027238
N
0.781
ZCCHC17
Erinaceus europaeus
ENSEEUG00000014855
N
0.770
XP_001381726.1
Monodelphis domestica
ENSMODG00000017082
N
0.757
Q6R2T1_CHICK
Gallus gallus
ENSGALG00000000618
N
0.733
ZCCHC17
Meleagris gallopavo
ENSMGAG00000000777
N
0.727
XM_001381689.1
Monodelphis domestica
ENSMODG00000020372
N
0.716
ZCCHC17
Procavia capensis
ENSPCAG00000011665
N
0.716