LOC_Os02g19860 (Oryza sativa)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 LOC_Os02g19860 T60702_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os02g19860.1 S1 278 352

Links

Other S1 family RBPs
Other Oryza sativa RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE006610 Oryza indica BGIOSIBCE006610 N 1.000
BRADI3G13460 Brachypodium distachyon BRADI3G13460 N 0.933
GRMZM2G029258 Zea mays GRMZM2G029258 N 0.933
SB01G044300 Sorghum bicolor Sb01g044300 N 0.933
ppa000417m Prunus persica ppa000417m N 0.800
Cucsa.133580 Cucumis sativus Cucsa.133580 N 0.787
GSVIVG00029863001 Vitis vinifera GSVIVG00029863001 N 0.787
30170.m013734 Ricinus communis 30170.m013734 N 0.760
B9N9A7_POPTR Populus trichocarpa POPTR_0015s05960 N 0.760
PK14265.1 Cannabis sativa PK14265.1 N 0.760
Medtr1g143710 Medicago truncatula Medtr1g143710 N 0.760
LjSGA_089147.1 Lotus japonicus LjSGA_089147.1 N 0.747
mgf003625m Mimulus guttatus mgf003625m N 0.733
AT3G26560 Arabidopsis thaliana AT3G26560-TAIR-G N 0.733
cassava6632.valid.m1 Manihot esculenta cassava6632.valid.m1 N 0.733
B9I516_POPTR Populus trichocarpa POPTR_0012s01120 N 0.707