Cucsa.133580 (Cucumis sativus)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Cucsa.133580 T60997_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.133580.1 S1 261 334

Links

Other S1 family RBPs
Other Cucumis sativus RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00029863001 Vitis vinifera GSVIVG00029863001 N 0.932
LjSGA_089147.1 Lotus japonicus LjSGA_089147.1 N 0.932
ppa000417m Prunus persica ppa000417m N 0.932
cassava6632.valid.m1 Manihot esculenta cassava6632.valid.m1 N 0.905
30170.m013734 Ricinus communis 30170.m013734 N 0.905
B9N9A7_POPTR Populus trichocarpa POPTR_0015s05960 N 0.892
mgf003625m Mimulus guttatus mgf003625m N 0.878
Medtr1g143710 Medicago truncatula Medtr1g143710 N 0.878
PK14265.1 Cannabis sativa PK14265.1 N 0.878
B9I516_POPTR Populus trichocarpa POPTR_0012s01120 N 0.838
GRMZM2G029258 Zea mays GRMZM2G029258 N 0.800
SB01G044300 Sorghum bicolor Sb01g044300 N 0.800
BGIOSIBCE006610 Oryza indica BGIOSIBCE006610 N 0.787
LOC_Os02g19860 Oryza sativa LOC_Os02g19860 N 0.787
AT3G26560 Arabidopsis thaliana AT3G26560-TAIR-G N 0.770
Glyma14g40560.1 Glycine max Glyma14g40560.1 N 0.743
BRADI3G13460 Brachypodium distachyon BRADI3G13460 N 0.733
PDK_20s1514981g002 Phoenix dactylifera PDK_20s1514981g002 N 0.703