Aqu1.223919 (Amphimedon queenslandica)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Aqu1.223919 T60973_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Aqu1.223919 S1 78 161

Links

Other S1 family RBPs
Other Amphimedon queenslandica RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_2200037 Capitella teleta estExt_Genewise1Plus.C_2200037 N 0.726
estExt_fgenesh1_pg.C_1060040 Nematostella vectensis estExt_fgenesh1_pg.C_1060040 N 0.726
AAI28969 Xenopus laevis AAI28969 N 0.714
polr2gl Danio rerio ENSDARG00000056127 N 0.714
XP_002157143.1 Hydra magnipapillata XP_002157143.1 N 0.714
POLR2G Anolis carolinensis ENSACAG00000001005 N 0.714
polr2g Xenopus tropicalis ENSXETG00000006022 N 0.714
POLR2G Monodelphis domestica ENSMODG00000007984 N 0.702
POLR2G Tursiops truncatus ENSTTRG00000002478 N 0.702
Polr2g Mus musculus ENSMUSG00000071662 N 0.702
POLR2G Macaca mulatta ENSMMUG00000014368 N 0.702
ENSMLUG00000003971 Myotis lucifugus ENSMLUG00000003971 N 0.702
ENSMLUG00000011039 Myotis lucifugus ENSMLUG00000011039 N 0.702
POLR2G Ornithorhynchus anatinus ENSOANG00000005808 N 0.702
POLR2G Oryctolagus cuniculus ENSOCUG00000009485 N 0.702
ENSPPYG00000003147 Pongo pygmaeus ENSPPYG00000003147 N 0.702
Polr2g Rattus norvegicus ENSRNOG00000019439 N 0.702
POLR2G Takifugu rubripes ENSTRUG00000002492 N 0.702
POLR2G Macropus eugenii ENSMEUG00000011547 N 0.702
POLR2G Oryzias latipes ENSORLG00000003154 N 0.702
POLR2G Procavia capensis ENSPCAG00000016408 N 0.702
POLR2G Pan troglodytes ENSPTRG00000003786 N 0.702
POLR2G Homo sapiens ENSG00000168002 N 0.702
XP_001176876.1 Strongylocentrotus purpuratus XP_001176876.1 N 0.702
XP_780458.1 Strongylocentrotus purpuratus XP_780458.1 N 0.702
XP_001175728.1 Strongylocentrotus purpuratus XP_001175728.1 N 0.702
XP_001175504.1 Strongylocentrotus purpuratus XP_001175504.1 N 0.702
PASA_GEN_8000031 Daphnia pulex PASA_GEN_8000031 N 0.702
Ame_R013924 Ailuropoda melanoleuca Ame_R013924 N 0.702
RPB7_BOVIN Bos taurus ENSBTAG00000009483 N 0.702
POLR2G Canis familiaris ENSCAFG00000015461 N 0.702
POLR2G Gasterosteus aculeatus ENSGACG00000017706 N 0.702
POLR2G Gorilla gorilla ENSGGOG00000011739 N 0.702
LOC100063883 Equus caballus ENSECAG00000021465 N 0.702
Polr2g Dipodomys ordii ENSDORG00000015696 N 0.702
LOC100398629 Callithrix jacchus ENSCJAG00000018688 N 0.702
POLR2G Cavia porcellus ENSCPOG00000001153 N 0.702
POLR2G Loxodonta africana ENSLAFG00000004354 N 0.702