PredSwiss_CON2711.1 (Pneumocystis carinii)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 PredSwiss_CON2711.1 T61401_0.6 Pneumocystis Genome Project (2010-Oct-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PredSwiss_CON2711.1 S1 59 140

Links

Other S1 family RBPs
Other Pneumocystis carinii RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PredSwiss_ASS2010_1331.1 Pneumocystis carinii PredSwiss_ASS2010_1331.1 N 0.878
SJAG_01436 Schizosaccharomyces japonicus SJAG_01436 N 0.744
SPOG_03808 Schizosaccharomyces cryophilus SPOG_03808 N 0.732
fgenesh3_pm.29__13 Postia placenta fgenesh3_pm.29__13 N 0.732
estExt_Genewise1Plus.C_1900018 Postia placenta estExt_Genewise1Plus.C_1900018 N 0.732
PGUG_02831 Candida guilliermondii PGUG_02831 N 0.732
CC1G_04529 Coprinopsis cinerea CC1G_04529 N 0.732
Cd36_01440 Candida dubliniensis Cd36_01440 N 0.723
fgenesh1_pg.C_chr_1.1000254 Pichia stipitis fgenesh1_pg.C_chr_1.1000254 N 0.723
DEHA0G08195g Debaryomyces hansenii DEHA0G08195g N 0.723
RPB7 Candida albicans orf19.3347 N 0.723
rpb7 Schizosaccharomyces pombe SPACUNK4.06c N 0.720
PredSwiss_CON3043.1 Pneumocystis carinii PredSwiss_CON3043.1 N 0.720
SOCG_01722 Schizosaccharomyces octosporus SOCG_01722 N 0.720
CPAG_00867 Candida parapsilosis CPAG_00867 N 0.711
LELG_01428 Lodderomyces elongisporus LELG_01428 N 0.711
CLUG_03627 Candida lusitaniae CLUG_03627 N 0.711