estExt_fgenesh1_pg.C_60396 (Sporobolomyces roseus)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 estExt_fgenesh1_pg.C_60396 T62365_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_60396 YTH 1604 1695

Links

Other YTH family RBPs
Other Sporobolomyces roseus RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
UM02724 Ustilago maydis UM02724 N 0.742
gw1.2.1711.1 Schizophyllum commune gw1.2.1711.1 N 0.739
e_gw1.37.103.1 Melampsora laricis populina e_gw1.37.103.1 N 0.739
estExt_fgenesh3_pg.C_830047 Postia placenta estExt_fgenesh3_pg.C_830047 N 0.728
e_gw1.2.841.1 Heterobasidion annosum e_gw1.2.841.1 N 0.728
fgenesh3_pg.C_scaffold_2000868 Laccaria bicolor fgenesh3_pg.C_scaffold_2000868 N 0.717
estExt_fgenesh2_pg.C_120175 Serpula lacrymans estExt_fgenesh2_pg.C_120175 N 0.717
fgenesh1_pg.C_scaffold_1000538 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_1000538 N 0.707
PGTG_07186 Puccinia graminis PGTG_07186 N 0.707
CC1G_01141 Coprinopsis cinerea CC1G_01141 N 0.707