amel4_ncbi_hmm9262 (Apis mellifera)
CCCH ZF,CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC) 		IPR000571
IPR001878 		amel4_ncbi_hmm9262 T00037_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm9262 CCCH ZF 38 61
amel4_ncbi_hmm9262 CCCH ZF 63 88
amel4_ncbi_hmm9262 CCCH ZF 91 116
amel4_ncbi_hmm9262 CCCH ZF 119 142
amel4_ncbi_hmm9262 CCCH ZF 144 168
amel4_ncbi_hmm9262 CCHC ZF 187 204
amel4_ncbi_hmm9262 CCHC ZF 246 263

Links

Other CCCH ZF,CCHC ZF family RBPs
Other Apis mellifera RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AGAP013044 Anopheles gambiae AGAP013044 N 0.811
amel4_ncbi_hmm9262 Tribolium castaneum amel4_ncbi_hmm9262 N 1.000
DGIL_AUG5s6088g2t1 Acyrtosiphon pisum DGIL_AUG5s6088g2t1 N 0.798
estExt_fgenesh2_pg.C_1120028 Branchiostoma floridae estExt_fgenesh2_pg.C_1120028 N 0.742
estExt_fgenesh2_pg.C_170094 Branchiostoma floridae estExt_fgenesh2_pg.C_170094 N 0.742
e_gw1.24.75.1 Daphnia pulex e_gw1.24.75.1 N 0.752
e_gw1.98.132.1 Lottia gigantea e_gw1.98.132.1 N 0.752
Clp Drosophila melanogaster FBgn0015621 N 0.790
GA17582-RA Drosophila pseudoobscura FBgn0077593 N 0.802
ISCW021476 Ixodes scapularis ISCW021476 N 0.791