PK01281.1 (Cannabis sativa)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		PK01281.1 T00349_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK01281.1 CCCH ZF 185 208
PK01281.1 RRM 346 406

Links

Other CCCH ZF,RRM family RBPs
Other Cannabis sativa RBPs

19 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
27613.m000645 Ricinus communis 27613.m000645 N 0.814
29223.m000023 Ricinus communis 29223.m000023 N 0.741
AT2G05160 Arabidopsis thaliana AT2G05160-TAIR-G N 0.759
BRADI4G44040 Brachypodium distachyon BRADI4G44040 N 0.706
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.839
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.839
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.770
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.847
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.713
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.701
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.759
MDP0000214614 Malus x domestica MDP0000214614 N 0.776
MDP0000906147 Malus x domestica MDP0000906147 N 0.759
Medtr5g102170 Medicago truncatula Medtr5g102170 N 0.729
PK20504.1 Cannabis sativa PK20504.1 N 0.776
B9GTF9_POPTR Populus trichocarpa POPTR_0002s22240 N 0.713
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.747
ppa003564m Prunus persica ppa003564m N 0.776
ppa019338m Prunus persica ppa019338m N 0.793