Zc3h6 (Dipodomys ordii)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSDORG00000013967 T02515_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000013129 CCCH ZF 161 186
ENSDORP00000013129 CCCH ZF 190 215
ENSDORP00000013129 CCCH ZF 214 239

Links

Other CCCH ZF family RBPs
Other Dipodomys ordii RBPs

59 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R012775 Ailuropoda melanoleuca Ame_R012775 N 0.974
Ame_R012777 Ailuropoda melanoleuca Ame_R012777 N 0.718
ZC3H6 Anolis carolinensis ENSACAG00000005815 N 0.808
Q17QY2_BOVIN Bos taurus ENSBTAG00000015965 N 0.769
ZC3H6 Bos taurus ENSBTAG00000020646 N 0.987
ZC3H8 Canis familiaris ENSCAFG00000007155 N 0.769
ZC3H6 Canis familiaris ENSCAFG00000007160 N 0.987
ZC3H8 Choloepus hoffmanni ENSCHOG00000010391 N 0.769
ZC3H6 Callithrix jacchus ENSCJAG00000016479 N 0.987
A6MKC0_CALJA Callithrix jacchus ENSCJAG00000016492 N 0.769
ZC3H6 Cavia porcellus ENSCPOG00000003445 N 0.731
ENSCPOG00000008258 Cavia porcellus ENSCPOG00000008258 N 0.718
CABZ01077452.1 Danio rerio ENSDARG00000075165 N 0.756
ZC3H6 Dasypus novemcinctus ENSDNOG00000000253 N 0.910
ZC3H8 Dasypus novemcinctus ENSDNOG00000018056 N 0.769
ZC3H8 Erinaceus europaeus ENSEEUG00000006984 N 0.718
ZC3H8 Homo sapiens ENSG00000144161 N 0.769
ZC3H6 Homo sapiens ENSG00000188177 N 0.987
ENSGACG00000005343 Gasterosteus aculeatus ENSGACG00000005343 N 0.731
ZC3H6 Gallus gallus ENSGALG00000008269 N 0.885
ZC3H6 Gorilla gorilla ENSGGOG00000001665 N 0.987
ZC3H8 Gorilla gorilla ENSGGOG00000009004 N 0.769
ZC3H6 Loxodonta africana ENSLAFG00000001151 N 0.962
ZC3H8 Loxodonta africana ENSLAFG00000004675 N 0.769
ZC3H6 Meleagris gallopavo ENSMGAG00000003025 N 0.885
ZC3H6 Myotis lucifugus ENSMLUG00000004896 N 0.897
ZC3H6 Macaca mulatta ENSMMUG00000016430 N 0.897
ZC3H6 Monodelphis domestica ENSMODG00000006612 N 0.744
Zc3h8 Mus musculus ENSMUSG00000027387 N 0.744
Zc3h6 Mus musculus ENSMUSG00000042851 N 0.872
ZC3H6 Ornithorhynchus anatinus ENSOANG00000012054 N 0.910
ZC3H6 Oryctolagus cuniculus ENSOCUG00000011125 N 0.936
ZC3H8 Oryctolagus cuniculus ENSOCUG00000011253 N 0.756
ZC3H6 Otolemur garnettii ENSOGAG00000002556 N 0.897
ZC3H8 Ochotona princeps ENSOPRG00000011183 N 0.731
ZC3H6 Ochotona princeps ENSOPRG00000012717 N 0.949
ZC3H4 Oryzias latipes ENSORLG00000011179 N 0.744
ZC3H8 Procavia capensis ENSPCAG00000015426 N 0.705
ZC3H6 Procavia capensis ENSPCAG00000015468 N 0.897
ENSPPYG00000012165 Pongo pygmaeus ENSPPYG00000012165 N 0.769
ZC3H8 Pan troglodytes ENSPTRG00000012362 N 0.769
ZC3H6 Pan troglodytes ENSPTRG00000012363 N 0.987
ZC3H6 Pteropus vampyrus ENSPVAG00000013728 N 0.974
Zc3h8 Rattus norvegicus ENSRNOG00000017647 N 0.756
Zc3h6 Rattus norvegicus ENSRNOG00000026277 N 0.821
ZC3H6 Sorex araneus ENSSARG00000001035 N 0.872
ZC3H8 Sorex araneus ENSSARG00000012883 N 0.705
ZC3H6 Sus scrofa ENSSSCG00000008096 N 0.987
ZC3H8 Sus scrofa ENSSSCG00000008099 N 0.769
ZC3H6 Spermophilus tridecemlineatus ENSSTOG00000008120 N 0.897
ZC3H6 Tupaia belangeri ENSTBEG00000016232 N 0.897
ZC3H8 Taeniopygia guttata ENSTGUG00000007468 N 0.795
ENSTNIG00000016608 Tetraodon nigroviridis ENSTNIG00000016608 N 0.756
ENSTRUG00000012901 Takifugu rubripes ENSTRUG00000012901 N 0.769
ZC3H6 Tarsius syrichta ENSTSYG00000006672 N 0.987
ZC3H6 Tursiops truncatus ENSTTRG00000013154 N 0.987
ZC3H8 Vicugna pacos ENSVPAG00000005911 N 0.769
ZC3H6 Vicugna pacos ENSVPAG00000005912 N 0.987
zc3h6 Xenopus tropicalis ENSXETG00000013762 N 0.885