ENSPPYG00000013387 (Pongo pygmaeus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPPYG00000013387 T03220_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000014974 CCCH ZF 3 28
ENSPPYP00000014974 CCCH ZF 34 57
ENSPPYP00000014974 CCCH ZF 166 191
ENSPPYP00000014974 CCCH ZF 323 348

Links

Other CCCH ZF family RBPs
Other Pongo pygmaeus RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI06425 Xenopus laevis AAI06425 N 0.702
ABR68861 Xenopus laevis ABR68861 N 0.712
Ame_R009492 Ailuropoda melanoleuca Ame_R009492 N 0.863
B0F0H3 Xenopus laevis B0F0H3 N 0.712
MKRN2 Anolis carolinensis ENSACAG00000013310 N 0.806
Q2YDI8_BOVIN Bos taurus ENSBTAG00000004512 N 0.941
MKRN2 Canis familiaris ENSCAFG00000004967 N 0.980
MKRN2 Choloepus hoffmanni ENSCHOG00000005438 N 0.961
MKRN2 Callithrix jacchus ENSCJAG00000016733 N 0.912
MKRN2 Cavia porcellus ENSCPOG00000001208 N 0.922
mkrn2 Danio rerio ENSDARG00000007630 N 0.748
Mkrn2 Dipodomys ordii ENSDORG00000015621 N 0.835
LOC100057038 Equus caballus ENSECAG00000024404 N 0.853
MKRN2 Erinaceus europaeus ENSEEUG00000002217 N 0.784
MKRN2 Echinops telfairi ENSETEG00000003970 N 0.825
MKRN2 Felis catus ENSFCAG00000007979 N 0.912
MKRN2 Homo sapiens ENSG00000075975 N 0.971
MKRN2 Gasterosteus aculeatus ENSGACG00000003396 N 0.728
Q8UWH3_CHICK Gallus gallus ENSGALG00000004991 N 0.816
MKRN2 Gorilla gorilla ENSGGOG00000000429 N 0.971
MKRN2 Loxodonta africana ENSLAFG00000011601 N 0.902
MKRN2 Myotis lucifugus ENSMLUG00000017643 N 0.902
MKRN2 Macaca mulatta ENSMMUG00000009536 N 0.971
Mkrn2 Mus musculus ENSMUSG00000000439 N 0.961
MKRN2 Oryctolagus cuniculus ENSOCUG00000014171 N 0.961
MKRN2 Ochotona princeps ENSOPRG00000003501 N 0.951
MKRN2 Oryzias latipes ENSORLG00000009824 N 0.702
MKRN2 Procavia capensis ENSPCAG00000016175 N 0.941
MKRN2 Pan troglodytes ENSPTRG00000014634 N 0.971
Mkrn2 Rattus norvegicus ENSRNOG00000009176 N 0.971
MKRN2 Taeniopygia guttata ENSTGUG00000004017 N 0.740
MKRN2 Tarsius syrichta ENSTSYG00000007429 N 0.922
MKRN2 Vicugna pacos ENSVPAG00000011064 N 0.961